KEGG   Metapseudomonas resinovorans: PCA10_p1140
Entry
PCA10_p1140       CDS       T02708                                 
Symbol
hup
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
pre  Metapseudomonas resinovorans
Brite
KEGG Orthology (KO) [BR:pre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pre03032]
    PCA10_p1140 (hup)
   03036 Chromosome and associated proteins [BR:pre03036]
    PCA10_p1140 (hup)
   03400 DNA repair and recombination proteins [BR:pre03400]
    PCA10_p1140 (hup)
DNA replication proteins [BR:pre03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    PCA10_p1140 (hup)
Chromosome and associated proteins [BR:pre03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    PCA10_p1140 (hup)
DNA repair and recombination proteins [BR:pre03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      PCA10_p1140 (hup)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG TrmB SNRNP27
Other DBs
NCBI-ProteinID: BAN51498
UniProt: S6AYA3
LinkDB
Position
pCAR1.3:96543..96818
AA seq 91 aa
MNRQELVKAIADESGHSQSTVGEVLNSLISTVQNVVAGGDKVSLVGFGTFESTKQAERQG
RNPSTGAPITIAASIKPKFTPGKSFKERVNQ
NT seq 276 nt   +upstreamnt  +downstreamnt
atgaatcgtcaagaactcgtcaaagcgattgccgacgaaagcgggcacagtcagtcaacc
gtgggagaggtgctgaatagccttatctcgacggttcaaaatgtcgttgccggcggcgac
aaggttagcctcgtgggctttggtactttcgagtcaaccaagcaggccgagcgtcagggc
cgtaatccgtctaccggggctccgatcaccatcgctgcctcgatcaagccaaagttcacc
cctggcaagtccttcaaggaacgcgtcaaccagtaa

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