Plasmodium reichenowi: PRSY57_0002500
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Entry
PRSY57_0002500 CDS
T08079
Name
(RefSeq) ATP-dependent RNA helicase UAP56
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
prei
Plasmodium reichenowi
Pathway
prei03013
Nucleocytoplasmic transport
prei03015
mRNA surveillance pathway
prei03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prei00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PRSY57_0002500
09122 Translation
03013 Nucleocytoplasmic transport
PRSY57_0002500
03015 mRNA surveillance pathway
PRSY57_0002500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prei03019
]
PRSY57_0002500
03041 Spliceosome [BR:
prei03041
]
PRSY57_0002500
Enzymes [BR:
prei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PRSY57_0002500
Messenger RNA biogenesis [BR:
prei03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PRSY57_0002500
Spliceosome [BR:
prei03041
]
Complex C
Other components
EJC/TREX
PRSY57_0002500
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
PRSY57_0002500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Utp25_C
Motif
Other DBs
NCBI-GeneID:
24529074
NCBI-ProteinID:
XP_012760977
UniProt:
A0A151L3R7
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MASMDHSAQDELVDYEDDENILDSKDAKGNLGNNILNNNNKGGAMRGSYATVHTGGFKDF
FLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQLDTN
ENQDMQDTKEMNNDNNNNGDNKFVRCLGLAHTRELAYQIKNEFDRFSKYLKNVRCEVVYG
GISMNKHIKLFKEDNIPHIIIGTPGRILALIREKYLITDKIQHFVLDECDKCLEKLDMRS
DVQKIFISTPLKKQVMFFSATMAKEMRDVCKKFLQNPVEIFIDDEAKLKLHGLLQHYVKL
QEKDKTRKLIEILDALEFNQVIIFVKSVTRAITLDKLLTECNFPSIAIHGGLEQQERIER
YDKFKKFENRILVSTDLFGRGIDIERVNIVINYDMPENSDSYLHRVGRAGRFGTKGLAVT
FVSSQEDTLALNEVQTRFEVAISEMPNK
NT seq
1345 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaatggatcatagtgctcaagatgaattagtagattatgaagatgatgagaat
atattagatagtaaagatgctaaagggaatttaggaaataatattttaaataataataat
aagggtggagctatgagaggtagttatgcaactgtgcatacaggaggatttaaagatttt
tttttaaaaccagaattattaagagcaataagtgaaagtggttttgagcatccttcagag
gtacagcaagaaactattcccgcagcaattacaggaactgatatcctttgtcaggccaag
agtggtatgggaaaaacagccgtttttgttttatccattttacaacagcttgatacgaat
gaaaatcaagatatgcaggacacgaaagaaatgaataatgacaacaataataatggagac
aataaatttgttaggtgtcttggtttagcacatactcgagagttggcttatcaaataaag
aatgaattcgataggtttagtaaatatttaaaaaatgtaagatgtgaagttgtatatgga
ggtatatcaatgaataagcatataaaattatttaaagaagataatattccacatataatt
atagggacaccaggaagaatattagcattgataagagagaagtatttaattacagataaa
attcaacattttgttttagatgaatgtgataaatgtttagaaaaattagatatgagaagt
gatgttcagaaaatttttatatcaacacctttaaaaaaacaagttatgtttttttcagca
actatggctaaagaaatgagagatgtgtgtaaaaagtttttacaaaatccggtggaaatt
tttattgatgatgaagcaaaattaaaattacacggattattacaacattatgttaaatta
caagaaaaagataaaacaaggaaacttatcgaaatattagatgctttagaattcaaccaa
gttattatctttgttaaatcagttacaagagctatcacattagataaattattaacagaa
tgtaatttcccatccatagctatccatggaggtcttgaacaacaagaaagaatagaaaga
tatgataaatttaaaaaattcgaaaatagaatcttagtatcaactgatttattcggaaga
ggtatcgatattgaaagagttaatattgttatcaattatgatatgccagaaaattcagac
tcttatttacatagagtaggacgtgctggaagatttggtaccaaaggtctagccgttact
tttgtttcttcacaagaagatactttggcattgaatgaagtccaaacaagatttgaagtt
gccatctcagaaatgccaaataaaa
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