Plasmodium reichenowi: PRSY57_0320100
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Entry
PRSY57_0320100 CDS
T08079
Name
(RefSeq) ATP-dependent RNA helicase DDX6, putative
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
prei
Plasmodium reichenowi
Pathway
prei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PRSY57_0320100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prei03019
]
PRSY57_0320100
03036 Chromosome and associated proteins [BR:
prei03036
]
PRSY57_0320100
Enzymes [BR:
prei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PRSY57_0320100
Messenger RNA biogenesis [BR:
prei03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
PRSY57_0320100
mRNA degradation factors
5'-3' decay
Decapping complex
PRSY57_0320100
Chromosome and associated proteins [BR:
prei03036
]
Eukaryotic type
Gene silencing
piRNA pathway
PRSY57_0320100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Arcadin_1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
24529381
NCBI-ProteinID:
XP_012761279
UniProt:
A0A060RNS6
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Position
3:754137..755660
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AA seq
433 aa
AA seq
DB search
MSYKTNCTNSNANTNTLNSSSNYNKIDDNLILDEEWKKKILEPLKDLRYKTEDVTKTKGN
EFEDYFLKRELLMGIFEKGYEKPSPIQEESIPVALAGKNILARAKNGTGKTAAFAIPLLE
KCNTHKNFIQGLILVPTRELALQTSAMIKELGKHMKVQCMVTTGGTSLREDIMRLYNVVH
ILCGTPGRILDLANKDVANLSGCHIMVMDEADKLLSPEFQPIVEELMKFLPKEKQILMYS
ATFPVTVKEFRAIYLSDAHEINLMDELTLKGITQYYAFVKERQKVHCLNTLFAKLQINQA
IIFCNSITRVELLAKKITELGYSSFYIHARMSQTHRNRVFHDFRNGACRCLVSSDLFTRG
IDIQSVNVVINFDFPKNSETYLHRIGRSGRYGHLGLAINLITFEDRFNLYKIEVELGTEI
QPIPNEIDPSLYT
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagttataaaaccaattgtacgaactctaatgctaatacaaatactttgaatagttct
tcaaattataacaaaatagatgataatttaatattagatgaagaatggaaaaagaaaatt
ctggaacctttaaaagatctaagatataagacagaagatgtaacgaaaacgaaaggaaat
gaatttgaagattattttttgaagagagaattattaatgggtatctttgaaaaaggatat
gagaaaccatcacctatacaagaggaaagtatacctgtagctttggctggaaaaaatatt
ttagcaagggcaaaaaatggtacagggaaaacagcagcttttgctatacccttactagag
aaatgtaatacccacaaaaattttattcaaggactcattttggtacccacgcgagaactt
gccctacagacctctgctatgattaaggaattaggaaaacacatgaaagtacagtgtatg
gtaacaaccggtggtacgtcactaagagaagatataatgaggttgtataatgtagttcat
attttatgtggtactccaggaagaatattagacttagcaaataaggatgtagcaaattta
tcaggttgtcatattatggttatggatgaggcagataaattattatcacctgaatttcaa
cctatagtagaagaactaatgaaatttttaccaaaagaaaaacagatacttatgtattct
gctacctttcctgtgactgtaaaagaatttcgagctatttatttatcggatgcacatgaa
ataaatcttatggatgaattaacgttaaaaggaataacacaatattatgcttttgttaaa
gaaagacaaaaagtacattgtttaaatacattatttgctaaacttcaaattaatcaagct
atcatcttctgtaatagtattactagggtagaactactagccaaaaaaattaccgaactt
ggatatagctctttttacattcatgcaagaatgtcacaaacacatcgtaatcgtgttttt
catgattttagaaatggagcatgtaggtgtttagtttcctcagatctattcacaagaggt
attgacatacaatcagtcaatgttgttatcaattttgatttcccaaagaattctgaaact
tatttacatagaataggaagatcaggaagatacggacatctaggattagctattaatctt
ataacttttgaagatcgttttaatttatataaaatagaagtagaactaggaacggaaata
caaccaataccaaacgaaattgacccatccttatatacctaa
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