Plasmodium reichenowi: PRSY57_0406600
Help
Entry
PRSY57_0406600 CDS
T08079
Name
(RefSeq) 40S ribosomal processing protein, putative
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
prei
Plasmodium reichenowi
Brite
KEGG Orthology (KO) [BR:
prei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
prei03009
]
PRSY57_0406600
04121 Ubiquitin system [BR:
prei04121
]
PRSY57_0406600
Ribosome biogenesis [BR:
prei03009
]
Eukaryotic type
90S particles
Other 90S particles
PRSY57_0406600
Ubiquitin system [BR:
prei04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
PRSY57_0406600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Sof1
WD40_CDC20-Fz
WDR55
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
NBCH_WD40
WD40_RFWD3
Beta-prop_SCAP
KNTC1_N
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
24529481
NCBI-ProteinID:
XP_012761384
UniProt:
A0A060RNY6
LinkDB
All DBs
Position
4:276723..278174
Genome browser
AA seq
483 aa
AA seq
DB search
MEIKILHRNPEEYKNNKGTSNYKHVRSFDKKIHLFQREVEYKRALNATKMDKIFAKPLIK
CLDGHDDSIKSICVSNKNLSDLYSGSCNGIINMWNVLDKKLIKKIKAHDGFVRSLCMSYD
EKFLFSCGDDKYIKQWVIYKNKNINDIINEEQDNIHQGHNNDITQESNNIYEQQNDNQFH
YLEKEDVPKKIYVCKNVPNSIDKLFSENLIVSGSQTLDIWDYYRNNAISSFDYNNEYIYY
VKCNYSQTNLVGLTLSDNSIGIVDIRNKTPIKKLYLKYRSNSLSWNNMNPKQFVIANEDS
NLYSFDMRYLKTAYLVHKGFVNAVLDVDFSPIGNKFVACSYDKTVRLFNSDEPTSYDVYH
TKRMQHVLCCKFSQDAKYVFTGSSDMSLRIWKSISHEPSGILSNKEKQAINYRNKLKEKF
ASLKEIKRIRQHHHVPALIKSLSDKKKVMLEAKKRKEKNKIQHSKNPEQLPIPEKKKIFV
TEQ
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggagataaaaatattacatagaaacccagaggaatataaaaataataaggggacatca
aattacaaacatgtaagaagttttgataagaagattcatttatttcaaagagaagtagaa
tataagagagctctgaatgccaccaagatggataaaatatttgccaagcctttaattaaa
tgtttagatggacatgatgattctataaaaagtatttgtgtatcgaataaaaacttgagc
gatttatacagtggaagttgtaatggtataattaatatgtggaatgtactagataagaaa
ttaattaaaaaaataaaagcacatgatggatttgttcgtagcctatgtatgagttatgat
gagaaatttttatttagttgtggtgatgacaaatatattaaacaatgggtaatttataaa
aataaaaatattaatgatataataaatgaagaacaagataatatacatcaaggacacaat
aatgatataacacaagaatcaaataatatatatgaacaacaaaatgataaccagtttcat
tatttagaaaaagaagatgtacccaaaaaaatttatgtttgtaaaaacgttcctaatagt
atagataaactcttttcagaaaatcttattgtttcaggtagccaaaccttagatatttgg
gattattatagaaataatgcaatatctagttttgattataacaatgaatatatatattat
gtaaaatgtaattattcacaaaccaatttagtaggattaacactctctgacaattctata
ggtatagtagatataagaaataaaacacctattaaaaaattatatctaaaatatagaagt
aattcattaagttggaataatatgaatccaaaacaatttgttattgccaatgaagattct
aatttatattcttttgatatgagatatttaaaaacagcttatctagtacataaaggtttt
gttaatgctgtgctagatgtagatttctctcccataggaaataaattcgttgcatgttct
tacgataagactgttagattatttaattcagacgaacccacaagttatgatgtatatcat
actaaaagaatgcaacatgttttgtgttgtaaatttagtcaagatgctaaatatgtcttt
acaggtagtagtgatatgtccctacgcatatggaaaagcatttctcatgaaccctcagga
attttatccaataaagaaaaacaagccattaattatagaaataaattaaaagaaaaattc
gcatcattaaaagaaattaaaagaataagacaacatcatcatgtgccagccttaatcaaa
agcttgtctgataaaaagaaggtcatgctcgaagcaaaaaagagaaaggaaaagaacaaa
atacaacattcaaaaaatccagagcagttacctattccggagaagaaaaaaatttttgtc
acagagcaataa
DBGET
integrated database retrieval system
