Plasmodium reichenowi: PRSY57_0407800
Help
Entry
PRSY57_0407800 CDS
T08079
Name
(RefSeq) exosome complex component RRP4, putative
KO
K03679
exosome complex component RRP4
Organism
prei
Plasmodium reichenowi
Pathway
prei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PRSY57_0407800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prei03019
]
PRSY57_0407800
Messenger RNA biogenesis [BR:
prei03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PRSY57_0407800
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
PRSY57_0407800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP4
KH_6
ECR1_N
RRP40_S1
S1
Motif
Other DBs
NCBI-GeneID:
24529493
NCBI-ProteinID:
XP_012761394
UniProt:
A0A151LSB5
LinkDB
All DBs
Position
4:<309142..>310126
Genome browser
AA seq
328 aa
AA seq
DB search
MMDILITTPYDKEVCEIGEITNKIISLETIKHTKSSLHKNRDIQCPNKKKLVLPGECVLD
KNDKDRFLKGGGLYEEDDMFHACILGRVNYINKLIYVEPLKGKYTGSVGDLLVGKIKDIS
NDKWIVEIGSYCRAFLSISQTNISIFSQRIRLYNDVINMIHIYKPDDIIACEIQRISTDG
TIILHTRSSIYGKLSNGVLIIVPQTLIHNQKKHIFVFPCNVQIILGMNGYIWISSPIKKS
KDTNPNSVDQNIEENKFEDVDHTTRKNISIITNIIKLLVKYHININYDTINKIYVHYTSN
TNNTPSYILKPYVADSYLFNYIDKFVSS
NT seq
985 nt
NT seq
+upstream
nt +downstream
nt
atgatggatatccttatcaccacgccgtatgataaagaagtttgcgaaataggagaaatt
actaacaagataatttctctagaaactattaagcatacaaaaagtagtttacataagaat
cgggatatacaatgtcccaacaaaaagaagcttgtgttaccaggagaatgtgttttagat
aagaatgataaagatcgttttttaaaaggcggtggtttatatgaagaagatgatatgttt
catgcgtgtattttaggtagagtgaattacattaataaattaatatatgtagaaccttta
aaaggaaagtatacaggttctgttggagatttattagttggtaaaattaaagacataagt
aatgataaatggattgtagagataggttcttattgtagagcttttctttctatatctcaa
actaatataagtatattcagtcaaagaattagattatataatgatgttataaacatgata
catatttataaacctgatgatattattgcatgtgaaattcaaagaatatcaacagatggt
actattattctacataccagatcatctatttatgggaaattatcgaacggtgttttaatt
attgtcccacaaactttaatacataatcaaaaaaaacatatttttgttttcccttgtaat
gttcaaattatattaggaatgaatggttatatatggatttcttcacctatcaaaaaatca
aaagatactaatcctaatagtgttgatcaaaatattgaagaaaataaatttgaagacgtt
gatcacactaccagaaaaaatatttctataattactaatattattaaattacttgtcaag
tatcatatcaatattaattatgatactattaataaaatatatgtacattatacatcaaac
acaaataatacgccctcatatatattaaagccttatgtagccgattcgtatttgtttaac
tatatagataagtttgtaagctcga
DBGET
integrated database retrieval system
