Plasmodium reichenowi: PRSY57_0717200
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Entry
PRSY57_0717200 CDS
T08079
Name
(RefSeq) exosome complex component CSL4, putative
KO
K07573
exosome complex component CSL4
Organism
prei
Plasmodium reichenowi
Pathway
prei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PRSY57_0717200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prei03019
]
PRSY57_0717200
Messenger RNA biogenesis [BR:
prei03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PRSY57_0717200
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
PRSY57_0717200
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Gene cluster
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
RRP4_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
24530421
NCBI-ProteinID:
XP_012762280
UniProt:
A0A060RW26
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All DBs
Position
7:681397..682105
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AA seq
195 aa
AA seq
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MNFEDDDDIVIPGEFLGLQAEYINGNNTYLLKGEIRSSILGQKIINKNNDKKTIISVYNL
KPPSLYLPKIGDIVICKIQRVSFHMIYCYILSSHNIFTKNALKGFILKSDIHINEGELGD
NFICFKQGDIIKAKVLSIGQYSSYKLSTVGSELGVIAAFNQKGEILRPVAWNLVLNINDM
TFERRKASNDFSLLL
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgaagatgacgatgatattgttataccaggagagttcttaggtttacaagct
gaatatataaacggtaataatacatatttattaaaaggtgaaataagatcaagtatactt
ggtcaaaaaattataaataaaaataatgacaagaaaacaattataagtgtatataatttg
aaaccaccttctttatatcttcccaaaataggggatatagtaatatgtaaaatacaacgt
gtatctttccatatgatatattgttatatcctttcatcacataatatatttacaaagaac
gcattaaaaggatttatattaaaaagtgatatacatataaatgaaggagagttaggcgat
aattttatatgttttaaacaaggagatataataaaagctaaagttttgtccataggccaa
tattcatcttataagttatcgacagttggttcagaactaggagtcatagcagcatttaac
caaaagggcgaaatattaagaccagttgcttggaacctcgtattaaacataaatgacatg
acctttgaaagaagaaaagcttcaaacgatttttctctcctcctttaa
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