Plasmodium reichenowi: PRSY57_0915600
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Entry
PRSY57_0915600 CDS
T08079
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43, putative
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
prei
Plasmodium reichenowi
Pathway
prei03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prei00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PRSY57_0915600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prei03041
]
PRSY57_0915600
03009 Ribosome biogenesis [BR:
prei03009
]
PRSY57_0915600
Enzymes [BR:
prei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PRSY57_0915600
Spliceosome [BR:
prei03041
]
Complex A
U2 snRNP components
U2 related factors
PRSY57_0915600
Complex B
PRSY57_0915600
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
PRSY57_0915600
Ribosome biogenesis [BR:
prei03009
]
Eukaryotic type
90S particles
Helicases
PRSY57_0915600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
Flavi_DEAD
nSTAND3
AAA_19
ResIII
T2SSE
SRP54
ATPase
Helicase_RecD
AAA_30
AAA_7
PhoH
TsaE
FtsK_SpoIIIE
DUF6862
Motif
Other DBs
NCBI-GeneID:
24531005
NCBI-ProteinID:
XP_012762850
UniProt:
A0A151LHM5
LinkDB
All DBs
Position
9:complement(660951..663428)
Genome browser
AA seq
825 aa
AA seq
DB search
MSEEEDNQSNNISLERNTVSEECTNSMNERTKKKKLDNIINEENNKKIKLNNNCYEQDDD
EKNLFDNNKINEYNILDKDNKNVDSNITNNINLNKCNVKVENNILNNITNVQNDILSKEN
NNNNDNNNYNNIQPTTHTSVVTNNEDDSMINKLTNQKYSQRYLQLLEEKKKLPAWSAKKN
FLKLLKKNNVLIIVGDTGSGKTTQISQFVLESKYAEKKSIAVTQPRRVAAMSVAARVSEE
LDVELGTYVGYTIRFEDKSSNKTIIKYLTDGMLLRESMSDPLLTKYNTIILDEAHERTLA
TDILFGVIKNIQEKRNDLKLIVMSATLDAEKFQKFFNNSKILNIPGRLFPVEIFYTLQAE
KDYVKVVIRTVYDIHINEEEGDILVFLTGEEEIEMTKKEIERVVSRNMNAGQLVVLPLYS
SLPPAQQQKIFEPPPKPRFKGDKNGRKCILATNIAETSITIDGIVYVIDPGFSKQKVYNP
RARIESLLIAPISKASAQQRAGRAGRTKPGKCFRLYTEKCFEETLPEQTYPEILRSNLGS
VVLNLKKLGIDDLVHFDFMDPPAPETLMRALEQLNYLGALDDEGDLTNKGHLMSEFPVDP
QLAKVLIESPNYSCSSEILTIAAMLSVPNCFLRPKVKVKEADEMKMRFSHLDGDHLTLLN
VFHAYVKHALVDTNESKKFCFEYFLNHRAMTSAQNVRQQLLRIMERLNLKILSIKPSNPE
YYINIRKALLSGFYQQVAYKTSKGYYITVKDIQMVTLHPSTVFQMNPEWVVYHELLLTSK
NFIRTVTKIEGKWLLEIARNYYNLEDLPNSEAKNELKMLHKKLNH
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaggaagataatcaatccaataatatttcgctagaacgaaatactgtatca
gaagaatgtacaaatagtatgaatgaacgtaccaaaaaaaaaaaactagataatataata
aatgaggaaaataataagaagataaaattaaataataattgttatgaacaagatgatgac
gaaaaaaacttatttgataataataagataaatgaatataatattcttgataaagataat
aaaaatgtggattctaatataactaataatataaatctaaataagtgcaatgttaaggta
gaaaataatattttaaataatattacaaatgtacaaaatgatatattatctaaagaaaat
aataataataatgataataataattacaataatattcaacctactactcatacaagtgtc
gtcactaataatgaggacgattcaatgattaacaaattgaccaatcaaaaatacagtcag
agatatctacaacttttagaagagaaaaaaaagttaccagcatggagtgcaaaaaagaac
tttttaaaattgctcaaaaaaaataatgtactaattatcgttggtgatacaggtagtgga
aaaacaacacaaatatctcaattcgttttagaatcaaaatatgcggaaaaaaaatctata
gctgttacacaaccaagaagggtagcagctatgagcgtagctgcgcgagtatccgaagaa
ttagatgttgaattaggtacttacgttggttataccataagatttgaagataaatctagt
aataaaactataataaaatatttaacagatggtatgttattaagagaatctatgagtgat
cctctgttaacaaaatataatactataatattagatgaagcacatgaaaggacattagct
acggatatattatttggcgtcataaaaaatattcaagaaaaaagaaatgatttaaaatta
atagtaatgtctgcaacattagatgcagaaaagtttcaaaaattttttaataattcaaaa
attttaaatataccaggaagattatttcctgtggaaatattttatactctacaagctgaa
aaagattatgtaaaggttgtaattaggacagtatatgatatacatataaatgaagaagaa
ggagatattttggtttttttaacgggtgaagaagaaattgaaatgacgaaaaaagaaatt
gaaagagttgtttcaagaaatatgaatgctggtcaactggttgtacttcctttatattca
tctttaccacctgcacaacagcaaaaaatatttgaaccaccaccaaaacctagatttaaa
ggtgataaaaatggacgaaaatgtatattagcaacaaatattgcagaaacatctataact
attgatggtattgtctatgtaattgatccaggtttttcaaaacaaaaagtatataatcct
agggctcgtattgagtccttactcattgcaccaatatctaaagcttctgctcaacaaaga
gctggaagagctggtagaactaaaccaggaaaatgttttagattatatactgaaaaatgt
tttgaagaaaccttaccagaacaaacatatccagaaatattaagatcgaatttaggttca
gttgtattaaatttaaagaaattaggcatcgatgatttagttcattttgattttatggac
ccgcctgctccagaaacattgatgagagcattagaacaattaaattatttgggagcttta
gatgacgaaggagatttaacaaacaaaggacatttaatgtctgaattccctgtagatcct
cagctagcgaaagtgttaattgaatccccaaattattcatgttctagtgaaatattaact
atagctgcaatgttatctgttcctaattgttttctaagaccaaaggtaaaggttaaagaa
gcagatgaaatgaaaatgagattctcacatttagatggcgatcatttaactttacttaat
gtatttcatgcatatgtaaaacatgcacttgttgatacaaatgaatcaaagaaattttgt
tttgaatattttttaaatcatagagctatgacatcggcgcaaaatgtaagacaacaatta
ttaagaattatggaaagattaaatttaaaaattctttctattaaaccttcaaaccctgaa
tattatataaatattaggaaagccttattaagtggattttatcaacaagtagcatataaa
acaagtaaaggatattacattactgttaaagatatacaaatggtgaccttacacccatct
accgtctttcaaatgaatccagaatgggtagtatatcatgaactcttattaactagtaaa
aattttataagaactgtaacaaaaattgaggggaagtggctcctagaaatagctcgaaat
tattataacttagaagatcttccgaatagtgaagcaaaaaatgagctgaaaatgttgcat
aaaaaattgaaccattga
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