Plasmodium reichenowi: PRSY57_1029400
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Entry
PRSY57_1029400 CDS
T08079
Name
(RefSeq) RNA helicase, putative
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
prei
Plasmodium reichenowi
Pathway
prei03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prei00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PRSY57_1029400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prei03041
]
PRSY57_1029400
Enzymes [BR:
prei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PRSY57_1029400
Spliceosome [BR:
prei03041
]
Complex C
Other components
Step II factors
PRSY57_1029400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
AAA_22
DEAD
S1
AAA_19
T2SSE
PhoH
nSTAND_NTPase5
Sigma54_activ_2
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
24531500
NCBI-ProteinID:
XP_012763336
UniProt:
A0A151LFT7
LinkDB
All DBs
Position
10:complement(<1139609..>1144178)
Genome browser
AA seq
1282 aa
AA seq
DB search
MDCLSKINLIRKVNEELYNSIGVEDDNLSEFLIYLCEKSTSLEEFCKDVFENGGVIEQAV
LKYIYNMIKKDNKKKDHNNDDDVNSKENILLQNLNYNDNNLEYKKIEMKNEKMKKYHCLT
LKNEDIINLVDSDENDKKEKSIKGTKEKKESIEIISKQKNSDINVTTLDLSDSSYQKKKR
KKKYSTGGSSKNTESSFETKDIKKDNKYESGKKRKYDERYYDRHSKEHPHSNKHRHSKEH
HHSNKHRHSKEHRHSNDHGHSKEHHHSKEHHHSNKHHHRRHISSSSDSTNYNNKKKKEKK
HSDKKNEEHKSYDDYMSLKLNNIFNGTINKITDFGLFVSFKTNEGYKEGLVHATDILPNR
KRVVNMNEKFKRNMKVKVKVKGIFNQKISLNMSEVDQRTGKNLVNDDINKEEDNYISLFD
DINEDFNDLKKKNAHVFKDDPKETLKYESVIKIQSDYSKWEIQQLIKSGVVFDENIKNEY
KNLKIDEKIEDEEDIIEIEVNEKEPAFLKGQTTKAGAKLSPIQIIVNAEGSLAKAITTTS
ALAKERKEQKQNEQNAIYDNIPKDISRPWEDPKPNLGERTIAEALKNIGKNYDIPEWKKN
YNNNNISVGVKNTLPINEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYL
HEANYTEKGIVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLT
DGMLLRETLSDTLLTKYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDA
EKFSTYFFNSPIFTIPGKIFPVEILHSKEPESDYVEASLITVLNIHLNEHPGDILVFLTG
QDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGCRKCILATNI
AEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGRAGRTGPGKCYR
LYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHFDFMDSPSVETLIHSLENL
YYLGALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNFNCTDDVVTIVSMLSVQNIFYRP
QNKALLADKKKNKFIMPQGDLITYLNIYNKWKENSFSNYWCHENFIQSRALKRAQDVRKQ
MLSIFEKYNYQVKKSTSKNDATKYVNICKSICSGYFNHVCKRDTQQGYTTLLTNQQVFIH
PSSTLFNKNPLFVVYHELVLTNKEYIRDCTIIQPQWLIQLAPNLFIPADEKKISKIKLRE
KIEPLHNYYEEPNAWRLSRRKG
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggattgtttaagtaaaataaatttaattcgaaaagtaaatgaagaattatataacagt
ataggggtagaagatgataacctttccgagtttttaatttacttatgtgaaaaatctaca
tccttagaagaattttgtaaggatgtttttgaaaatggaggggtgattgaacaagccgtt
cttaaatatatatataatatgattaaaaaggataataaaaaaaaagatcataataatgat
gatgatgtaaatagtaaagaaaatattcttttgcagaacttaaattataatgataataac
ttagaatataaaaaaatagaaatgaaaaatgaaaagatgaaaaaatatcattgcctaact
ttaaaaaatgaagatattattaatttagtagatagtgatgaaaatgacaaaaaagaaaaa
tctataaaaggtacaaaagaaaagaaagaaagtatagaaattatatctaaacaaaaaaat
agtgatataaatgttactacacttgatcttagtgattcgtcttatcaaaaaaagaaaaga
aaaaaaaaatattctacaggtggtagcagtaagaataccgaatcgtcatttgaaacaaaa
gatataaaaaaggataataaatatgaaagtggaaagaaaagaaaatatgatgaaaggtat
tatgatcgtcatagtaaagaacatcctcatagtaataaacatcgccatagtaaagaacat
caccatagtaataaacatcgccatagtaaagaacatcgccatagtaatgatcatggccat
agtaaagaacatcaccatagtaaagaacatcaccatagtaataaacatcaccatcgtcgt
catatatcctcttcgtccgactccactaattacaacaataagaagaaaaaagaaaaaaaa
cacagtgataaaaaaaatgaggaacataaatcttatgatgattatatgagcctgaagctt
aataacatattcaacggcactataaataaaattaccgactttggattatttgtttccttt
aaaactaatgaaggctacaaagaaggacttgtccatgctacagatatattaccaaatcgg
aaacgtgtagttaatatgaacgaaaagtttaaaagaaatatgaaagtaaaagtaaaagtg
aaaggcattttcaatcaaaaaataagtttaaatatgtctgaagtagatcaaagaacaggg
aaaaatttagtaaatgatgatataaataaagaagaagataattatatttctttatttgat
gatataaatgaagattttaatgatttaaaaaagaaaaacgcacatgtattcaaagatgat
ccaaaggaaactttaaaatatgaaagtgttattaaaatacaaagtgattattctaaatgg
gaaatacaacaattaataaaaagtggagttgtatttgatgaaaatattaaaaatgaatat
aaaaatctaaaaatagatgaaaaaatagaagatgaagaagatattattgaaatagaagta
aacgaaaaagaacctgctttcttaaaaggacaaacaacaaaagctggtgcaaaattatca
cccatacaaattattgtaaatgctgaaggatcattagctaaagctataacaactacatca
gcattagcgaaagaaagaaaagaacaaaaacaaaatgaacaaaatgcaatatatgataat
atacctaaagatattagtagaccttgggaagatccaaaacctaatttaggagaaagaaca
atagcagaggctttaaaaaatattggaaaaaattatgatataccagaatggaaaaaaaat
tataataataataatatttctgtaggggttaaaaatacattaccaataaatgaacaaaga
tcaaaattaccaatatataatttaaaaaatgatttaatgaaagctatcgaaaaaaataat
gttctcattgttatcggagaaacaggtagtgggaaaacaacacaaataccacaatattta
catgaagcaaattatacagaaaaaggtattgttggatgtacacaacctagaagagtagca
gctatgtctattgctaaaagggtaagtgaagagttcggatgtattttaggacaagaagta
ggatattctatacgttttgatgattgtacatcgaatgatacaataataaaatatctaacc
gatggtatgttgcttcgagaaaccttaagtgacacattgttaacaaaatattccttcatc
atacttgatgaagcccacgaaagaaccatttctacagatatccttttctgtcttttaaag
gatgttgttagaaaacgagcggattttaaattaattgttacttcagccacgttagatgca
gaaaaattctcaacgtatttttttaattcgccaatttttactattccaggaaaaatcttt
cctgttgagatattacattccaaagaaccagagagcgattatgtcgaggccagtctcatt
accgtcctgaatatccacctgaatgaacaccctggagacattttagtctttttgacaggt
caagatgaaattaatacagcatgtgaaatattacacgagcgaatgaagaaattagaaagc
atgtctccaccacctttaatcatattacctatatattcttcattaccgtcagaaatgcag
agtgtgattttcgaacctgctcctccaggttgtcgaaaatgcattttagctacaaatata
gcagaagctagtttaacaattgatggtatattttttgttattgatccagggttttgtaaa
attaagaaatatgattcgaagagagatatggattctttaattgtagctcctatatctaag
gctaatgctaaacaaagagcaggtcgtgctggtagaacaggtcctgggaaatgttataga
ttatacacagaagaagcttataaaaatgaaatgtcagaaatgagtgtaccagaaatacaa
cgtataaatttaggtagtatagtattattattaaaagctttaggtataaatgattttctt
cattttgattttatggattctccatcagtagaaactttaatacattcactcgaaaattta
tattatttaggagctttagatgataatggctatttaacaaaactaggaaaaaagatggcg
aattttcctatggaaccaaatttatcaaaaatattattgacatctttaaattttaattgt
accgatgatgttgtaactattgttagtatgttaagtgtacaaaatattttctatcgtcca
caaaataaagctttattagctgataaaaaaaaaaataaatttatcatgccacaaggagat
ttaattacatatttaaatatatataataaatggaaagaaaatagtttctcaaattattgg
tgtcatgagaattttatacaatcaagagcattaaagagagcacaagatgtacgtaaacaa
atgttgtctatatttgaaaaatataattatcaagttaaaaaaagtactagtaaaaacgat
gccactaaatatgtaaatatatgtaaaagtatatgttctggttattttaatcatgtatgt
aaaagagatacacaacaaggatatacaacactcttaacaaatcaacaggtctttattcat
ccatcttcaacactctttaataaaaatcctttatttgttgtatatcacgaattagtatta
actaataaggaatatataagagactgtacgatcatacaaccacagtggctcatacaactc
gcaccaaatcttttcataccagcagatgaaaagaaaatatcgaaaataaagttgcgagaa
aaaattgagcctcttcacaattattatgaggagccaaacgcttggcgattatcacgaagg
aagggttaa
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integrated database retrieval system
