Plasmodium reichenowi: PRSY57_1127100
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Entry
PRSY57_1127100 CDS
T08079
Name
(RefSeq) CCR4-NOT transcription complex subunit 2, putative
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
prei
Plasmodium reichenowi
Pathway
prei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PRSY57_1127100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prei03019
]
PRSY57_1127100
Messenger RNA biogenesis [BR:
prei03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PRSY57_1127100
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PRSY57_1127100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
24531861
NCBI-ProteinID:
XP_012763689
UniProt:
A0A151LCD8
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Position
11:complement(1022497..1024389)
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AA seq
630 aa
AA seq
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MENNNINLNSNKEKNLNILSTNEKCFNKDDNVHNISDNFKDDNKFVNLFLRKNDQHVDCP
EIILDIEKNEHTVDKKGKLCIDSSDKKPEENIKKEHQNNEHDMLEKIHKGNHIDNIFSDN
KNEINFISEENKNENILNKKKNIYEQDTTYGDVYLISTEHNDTHINNDKDKIFTSNEHND
AHINKDKDKIFTSNEHNDAHINKDKDKIFTCNEHNDAHINKDKIFICNEHNDAHINKDKI
FTCNENNDAHINKDKIFTCNEHNDAHINKDKIFTCNEHNEEKIIIQKNVEVSDKKKKFNT
KDKEYINTINNKNCNIQDNHHDVSYEKNMLINENVRNINDTFSKTINSKFPKEEKRNEIR
KKNGSNQKTIINNDMVYDINEERTSVDEKIEKLRNDDILKSGDILKNNKILSCDEEGEEE
KNDLSLEEILYETTERSKSYNRKNYGLLGILKVIKMTDPNLNILAIGSDLTTLGLNLNSP
NYICTSVSSPFSENPIENEEDFIKPISYLNTKFQIRLSLLLKLQTETLFYIFYNLPRDVL
QAYAASELYIRKWIYHIIYKKWFTPNNTTSTINLEKCASWIYFDPLTWSKKTYNNYLNVK
DDIMNVEDVTKCIEQIIKLQSYYNIHQQNI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataataatataaatttaaattcaaataaagaaaaaaatctcaatatattatct
acaaatgagaaatgttttaataaagatgataatgtacataatatttctgacaatttcaag
gatgataataaatttgttaatctttttctcagaaaaaatgatcaacatgtagattgtcct
gaaattattttagatatagaaaaaaacgaacatacagttgataaaaaaggaaaattatgt
atagactcttctgataagaaacctgaagaaaatataaaaaaagagcatcaaaataatgag
catgatatgctagaaaaaatacataaaggcaatcatatagataatatatttagtgataat
aaaaatgaaattaattttatatcagaagaaaataaaaacgaaaatatattaaataaaaaa
aaaaatatatatgaacaggatactacttatggtgatgtatatcttatcagtactgaacat
aatgatactcatataaataatgataaagacaaaatttttacatctaatgaacataatgat
gctcatataaataaggataaagacaaaatttttacatctaatgaacataatgatgctcat
ataaataaggataaagacaaaatttttacatgtaatgaacataatgatgctcatataaat
aaagataaaatttttatatgtaatgaacataatgatgctcatataaataaagataaaatt
tttacatgtaatgaaaataatgatgctcatataaataaagataaaatttttacatgtaat
gaacataatgatgctcatataaataaagataaaatttttacatgtaatgaacataatgaa
gaaaaaataataatacaaaaaaatgtagaagtttctgataagaaaaaaaaatttaacacg
aaagataaggaatatattaatacaataaataataaaaattgtaatattcaggataatcat
catgatgtatcttatgaaaaaaatatgttgatcaacgaaaacgtgaggaatattaatgac
acattctccaaaactataaatagtaaatttcccaaggaggaaaaaagaaatgaaatcaga
aaaaaaaatggcagcaaccaaaagaccattattaataatgatatggtgtatgatataaat
gaggaacgtacaagtgttgacgagaaaattgaaaaattaagaaatgatgacatattaaaa
agtggggacatattaaaaaataataagattctatcatgtgatgaagaaggagaagaagaa
aaaaacgacctttccttagaagaaatattatacgaaacaacagaaagatcaaaaagttat
aatcgcaaaaattatggacttttaggtatattaaaggttataaaaatgacagaccctaat
ttaaatatattagctataggttctgatttaacaacactaggattaaatttaaattcccct
aattatatttgtacatctgtttcttcacccttttccgagaatcctatagaaaatgaagaa
gattttatcaaacctatatcatatttaaatacaaaatttcaaatacgattatctctatta
ttaaaattacaaacggagactttgttttatattttttataatttaccaagagatgtatta
caagcatatgcagcatcagaactttatataagaaaatggatatatcatattatatacaaa
aaatggtttacacctaacaatactacaagtacaatcaatctagaaaaatgtgcttcatgg
atatatttcgatcctttaacctggtcaaaaaaaacatataataattacttgaatgtgaaa
gatgatataatgaatgtagaggatgttacgaaatgtattgagcaaataattaaattacag
tcttattacaacatacatcagcaaaacatttag
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