Plasmodium reichenowi: PRSY57_1442600
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Entry
PRSY57_1442600 CDS
T08079
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5, putative
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
prei
Plasmodium reichenowi
Pathway
prei03018
RNA degradation
prei03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prei00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PRSY57_1442600
09123 Folding, sorting and degradation
03018 RNA degradation
PRSY57_1442600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prei03019
]
PRSY57_1442600
03041 Spliceosome [BR:
prei03041
]
PRSY57_1442600
Messenger RNA biogenesis [BR:
prei03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PRSY57_1442600
mRNA degradation factors
5'-3' decay
Lsm complex
PRSY57_1442600
Spliceosome [BR:
prei03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PRSY57_1442600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
24533687
NCBI-ProteinID:
XP_012765477
UniProt:
A0A060RZT1
LinkDB
All DBs
Position
14:<1728365..>1729011
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AA seq
101 aa
AA seq
DB search
MATISGSETFLPLALMDKCIGSKIWIMMKGDKEIVGKLVGFDEYVNMVLEDVTEYTYANN
VKKVNKIKKLLLNGLNITIMVPGGTPVNYYDYEEKLEDNIA
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atggctacaattagtgggtcagaaacatttttacccttggctttaatggataagtgtatt
ggaagtaaaatatggataatgatgaaaggcgataaagaaattgtaggtaaattggttgga
ttcgatgaatatgtaaatatggtattagaagatgttacagaatacacgtacgcaaataat
gttaaaaaagtaaataaaattaaaaaattattattaaatggattaaatataactattatg
gttccaggaggaactccagtgaattattatgattacgaagaaaagttagaagataatata
gcataa
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