Plasmodium relictum: PRELSG_0104600
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Entry
PRELSG_0104600 CDS
T09405
Name
(RefSeq) DNA mismatch repair protein MSH2, putative
KO
K08735
DNA mismatch repair protein MSH2
Organism
prel
Plasmodium relictum
Pathway
prel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PRELSG_0104600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prel03400
]
PRELSG_0104600
DNA repair and recombination proteins [BR:
prel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PRELSG_0104600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
GidB
AAA_27
Motif
Other DBs
NCBI-GeneID:
39734296
NCBI-ProteinID:
XP_028531411
UniProt:
A0A1J1H0G2
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Position
1:243008..245437
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AA seq
809 aa
AA seq
DB search
MSENILPNTSILDCNTVISFNLEIKSNIRYVGICIYNLDTNEFSLCEYIENEHFTTLESI
LIQCRPSCFLFLSSNDSIDDKRIKMILNLCEIKLEELSKNDFQSESIENDLNKLLKENNI
KNYISFLNLSIACKSLCSIIKYLSLLNDDSAISKCTLKNYNINEYVKLDKAAIISLNLFQ
DKSEEKKKNANSITLYSFLNKCKTKIGERKLLQWITHPIRDLKKINERLDMVEILKEDSV
TRSIIQSDYLRKVCDLQHIIKKFKLVTNTINDKKKISRNKNWCTIEDLVKLYDCIIVSKK
IYYCLSDYQGRYRKTLENNFLNPLKNIIISFDSFLKLVELTVDFEEIENNNYIISRKFDE
HLEKLANEKDHVYNLIKEHKIEVEEDINFLKGTKKIGTKEDIKLVECNTNVFLFRAVKKD
INYIQQRKKVYFQVRMNKSEILFHTNKLKDLCKKYENILYDYNIAQQELADKAIQVACSY
WEQVIKLSEIISEIDVLCSFALASTSSISSYVRPILEENGRILQMKDSRHPLLESNFLLM
NNFIPNDVYMNKDDKRLNIITGPNMGGKSTYIRQIALICLMAQLGSFVPCSYAKLPIFSQ
IMCRVGSSDIQLKGISTFFSEMIEISAIIKNADEKTLVIIDELGRGTSTYEGFGISWSIA
NYILNKIKCFCLFATHFHEMSNLEEECPSVINNHVAAKIDKERKKISFLYEIKKGYADKS
YGVHVAQIAKLPKNVIDKAFEKSKELESVENRHYFKTKLKLKNLENDQINTCNQYQMHLK
NIFNVNEEKEFISNVKESYSALKEILNEI
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaacattttacctaacacatctatattagattgtaatactgtgataagcttt
aatttagaaataaaaagtaacataagatatgttggaatatgcatttataatttagatact
aatgagttttctttatgtgaatatatagaaaatgagcactttactactttagaatccatt
ttaattcagtgtagaccttcctgttttttatttttatctagtaatgattcaatagatgat
aaaagaataaaaatgatattaaatttatgtgaaataaagttagaagagttatcaaagaat
gattttcaatcggaatctattgaaaatgacttaaataaattattaaaagaaaataatatt
aagaattatatatcatttttaaatttatcaattgcatgcaagtcattgtgtagtataata
aaatatttaagtttacttaatgatgatagtgcaattagtaagtgtactttaaaaaattat
aacattaatgaatatgtaaagttagataaagcggcaattatctccttgaacttatttcaa
gataaatctgaagaaaaaaaaaaaaatgctaattcaataacattatatagctttcttaat
aaatgtaaaacaaaaataggagaaaggaaactactacaatggattactcatccaataaga
gatttaaaaaaaataaatgaaagattagatatggtagaaatattaaaagaagatagtgta
acaagatctattatacagtcagactatttaagaaaagtgtgtgatttacaacatataatt
aagaaatttaaattagtcacaaatacaattaatgataagaaaaaaattagtagaaataaa
aattggtgtactattgaagatttagttaaattatatgattgtataattgtatcaaaaaaa
atttattattgtttaagtgattatcaaggaagatacagaaaaacattggaaaataatttt
ttaaatcctttaaaaaatattattattagttttgactcatttttaaagctagtagaatta
actgttgattttgaagaaatagaaaacaataattacataatatcacgtaaatttgatgaa
catctagaaaaattagcaaatgaaaaagatcatgtatataatttaataaaagaacataaa
atagaagtagaagaagatatcaattttttaaaaggaacaaaaaaaataggaactaaagaa
gatattaaattagtagaatgtaatactaatgtatttttatttagggcagtaaaaaaagat
ataaattacatacaacaaagaaaaaaagtttattttcaagttagaatgaacaaaagtgag
attttatttcatacaaataaattaaaagatttatgtaaaaaatacgaaaatatattgtat
gattataatatagctcaacaagaactagctgataaagctatacaagtagcatgttcttat
tgggaacaagttataaaattgtcagaaattatttcagaaattgatgtattatgttctttt
gctttagctagtacatcaagtatatcttcatatgtaagaccaatattagaagaaaatggg
cgcattttacaaatgaaggattctcgtcatcctttacttgaatcaaattttttattaatg
aataattttatacctaacgatgtttatatgaataaagatgataaaagattaaatataatt
actggtcctaatatgggaggaaaaagtacatatatcaggcaaatagctttgatatgccta
atggctcaattaggttcttttgttccttgttcttatgcaaagctaccaattttctctcaa
attatgtgtagagttggctcttcggatatacaacttaaaggaatatctacttttttttca
gaaatgattgaaatttctgctattataaaaaatgctgatgaaaaaaccctagtaattatt
gacgaattaggaagagggacttctacttatgaaggatttggtattagttggtctattgct
aattatattttaaacaaaataaaatgcttctgcttatttgctactcattttcatgaaatg
tcaaatttagaggaagaatgcccaagtgttatcaataatcatgttgcagctaaaattgat
aaagaaagaaaaaaaatttccttcttatatgaaattaaaaaaggatatgctgataaaagt
tatggagttcatgttgcacaaatagccaaattaccaaaaaatgttattgataaagctttt
gaaaaatctaaagaattagaatcagtagaaaataggcattatttcaaaaccaaattaaaa
ttaaaaaacctggaaaatgatcagataaatacttgtaatcaataccaaatgcatttaaaa
aatattttcaatgtaaatgaagaaaaagaatttatttctaatgtaaaggaaagttattct
gccctaaaagaaatattaaacgagatatag
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