Plasmodium relictum: PRELSG_0113500
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Entry
PRELSG_0113500 CDS
T09405
Name
(RefSeq) U2 snRNA/tRNA pseudouridine synthase, putative
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
prel
Plasmodium relictum
Brite
KEGG Orthology (KO) [BR:
prel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prel03016
]
PRELSG_0113500
Enzymes [BR:
prel01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PRELSG_0113500
Transfer RNA biogenesis [BR:
prel03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PRELSG_0113500
Prokaryotic type
PRELSG_0113500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
39734385
NCBI-ProteinID:
XP_028531495
UniProt:
A0A1J1H123
LinkDB
All DBs
Position
1:556988..558892
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AA seq
554 aa
AA seq
DB search
MNVSENNNKRKLNNYLRNKERIKKLKIERKENEKIEIRKKENENINNEEKNYNLKKYAIC
VGYIGSRYHGCQGQSKEAMTIENELERTLLKINAVKKKNKDFNFCLSRSARTDNGVHALY
NVFVYNINLDCIYLNNDKERENISKSQENNEKKSDKNNYDVINGSEMKNEHILIYEKKKE
INNNNINNCCNYNNSVIQNNEINKKQKESIKNNDDIFDERKKKEEEFKKLLNLHLPSDIR
CFDIFKVTKSFDARKFCSFRLYEYLFPIYVLSEVEVNIKYKKIFEEIIENIDKYVEKTKD
IKKRKKRNEYDNLSDMKKNNDENNKNSILEVNDNNDENVNNNEKNMENKRSFTQREDIFT
IKKYKEELTDEELNTFFEIFNNYTGFHNFHCFTKNNIDQTTYRYIKYFEISIVKLHNYNF
LSIKILGQSFLMHQIRKMITLAVETFRKATSKNSIYYCLNINRYIPISLFPSDGLILICP
YFNSYNKNVCKPPHSPTICFNENEEIKKFKEEKIGKCIIDKLEKNVWKDWLIKMNRYPFI
YHFIREKLNEDSNQ
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgtctgagaataataacaagagaaagttaaacaattacttgagaaataaggag
agaataaaaaaactaaaaatagaaagaaaagaaaacgaaaaaatagaaattagaaaaaaa
gaaaatgaaaatataaacaatgaagaaaaaaattacaatttaaaaaaatatgctatatgt
gttggttacattggtagtagatatcatggctgtcaagggcaaagtaaagaagcaatgaca
attgaaaatgaattagagagaacattattaaaaataaatgcagtaaaaaaaaaaaataag
gattttaatttttgcttatcaagatcagctagaactgacaatggtgtacatgctttatat
aacgtttttgtttataatattaatcttgattgtatatatttaaataatgataaagaaaga
gaaaatatttcaaaaagccaagagaataatgaaaagaaaagtgataaaaataattatgat
gttataaatggaagtgaaatgaaaaatgaacatattcttatatatgaaaaaaagaaagaa
atcaataataataatataaataattgttgcaattataataattccgttattcagaataat
gaaataaataaaaaacaaaaagagagtataaaaaataatgatgatatatttgatgaaaga
aaaaaaaaagaagaagaattcaaaaaattattaaatcttcatttaccttctgatataaga
tgctttgacatttttaaggttacgaaaagtttcgatgctagaaaattctgctcattccga
ttatatgaatatctatttcctatttatgttttaagtgaggtagaagtaaacattaaatat
aaaaaaatatttgaagaaattattgaaaatatagataaatatgttgaaaaaactaaagat
ataaaaaaaagaaaaaaaagaaatgaatatgataatttaagtgatatgaaaaagaataat
gatgaaaacaataaaaatagtatcttagaggtaaatgataataatgatgaaaatgttaat
aataatgaaaaaaatatggaaaataagagaagttttacacaaagagaggatatatttact
ataaaaaaatacaaagaagaattaacagatgaagaattaaataccttttttgaaatattt
aataattacacaggttttcataattttcattgttttacaaaaaataatattgatcaaacg
acatatagatatataaagtatttcgaaataagcattgtcaaattacataattataatttt
ttatcaataaaaatattagggcaatcatttttaatgcatcaaattagaaaaatgattact
ttagcagtagaaacatttcgtaaagctacatcaaaaaattctatttattattgtttaaat
ataaacaggtatatacctatttctttgtttccatctgatggtttaatattaatttgtcct
tactttaattcttataataaaaatgtatgtaaaccacctcatagccctacaatatgtttt
aatgaaaatgaagaaataaaaaaattcaaggaagaaaaaattggaaaatgtattatagat
aaattagaaaaaaatgtgtggaaagattggctaattaagatgaatcgttacccttttatt
tatcatttcataagagaaaaattaaatgaagattccaatcaataa
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