Plasmodium relictum: PRELSG_0203400
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Entry
PRELSG_0203400 CDS
T09405
Symbol
CSL4
Name
(RefSeq) exosome complex component CSL4, putative
KO
K07573
exosome complex component CSL4
Organism
prel
Plasmodium relictum
Pathway
prel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PRELSG_0203400 (CSL4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prel03019
]
PRELSG_0203400 (CSL4)
Messenger RNA biogenesis [BR:
prel03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PRELSG_0203400 (CSL4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
PRELSG_0203400 (CSL4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
ECR1_N_2
VtrC
Motif
Other DBs
NCBI-GeneID:
39734452
NCBI-ProteinID:
XP_028535495
UniProt:
A0A1J1HDI4
LinkDB
All DBs
Position
2:complement(94422..95170)
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AA seq
189 aa
AA seq
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MDNIVLPGEVIGSEKDYINGENTYVLKNEIRSTILGKKNIIVNNDNKKIINVDNIKSFVA
LPKAGDIVICKIYRVTFNMIYCNIILSNNKPLKNSFKGYINKSDIHIYEGELGDNFDCFK
QGDIIKAKILSIGQHSSYKLSTVGSDLGVIIALSDKGEILKPVAWNLMVNLDDMSFEQRK
VSNDFSIPV
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggataacatagtgttacctggagaagtaataggatccgaaaaagattatataaatggt
gaaaatacatatgtattaaaaaatgaaataagatcaactatattgggtaaaaaaaatatt
atagttaataatgataataaaaaaattattaatgtagataacattaaaagttttgtagct
ttacccaaagcaggagatattgttatatgtaaaatttatagagtaacatttaatatgata
tattgcaatattatattatcaaataataaaccattaaaaaattcatttaaaggatatata
aataaaagtgatattcatatatatgaaggtgaattaggcgataattttgattgttttaaa
caaggtgatataatcaaggccaaaattttatctataggacaacattcttcttataaatta
tcaacagtaggttctgatttaggtgtaattattgctttaagtgataaaggtgaaatatta
aagcccgttgcatggaatttgatggttaatttagatgatatgagttttgagcaaagaaaa
gtttctaatgatttttcaattcctgtttaa
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