Plasmodium relictum: PRELSG_0306800
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Entry
PRELSG_0306800 CDS
T09405
Symbol
RPA1
Name
(RefSeq) replication protein A1, large subunit, putative
KO
K07466
replication factor A1
Organism
prel
Plasmodium relictum
Pathway
prel03030
DNA replication
prel03420
Nucleotide excision repair
prel03430
Mismatch repair
prel03440
Homologous recombination
prel03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
prel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PRELSG_0306800 (RPA1)
03420 Nucleotide excision repair
PRELSG_0306800 (RPA1)
03430 Mismatch repair
PRELSG_0306800 (RPA1)
03440 Homologous recombination
PRELSG_0306800 (RPA1)
03460 Fanconi anemia pathway
PRELSG_0306800 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prel03000
]
PRELSG_0306800 (RPA1)
03032 DNA replication proteins [BR:
prel03032
]
PRELSG_0306800 (RPA1)
03400 DNA repair and recombination proteins [BR:
prel03400
]
PRELSG_0306800 (RPA1)
Transcription factors [BR:
prel03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
PRELSG_0306800 (RPA1)
DNA replication proteins [BR:
prel03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
PRELSG_0306800 (RPA1)
DNA repair and recombination proteins [BR:
prel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
PRELSG_0306800 (RPA1)
MMR (mismatch excision repair)
PRELSG_0306800 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
PRELSG_0306800 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
CDC24_OB3
Motif
Other DBs
NCBI-GeneID:
39734676
NCBI-ProteinID:
XP_028531593
UniProt:
A0A1J1H0U4
LinkDB
All DBs
Position
3:complement(307766..310756)
Genome browser
AA seq
996 aa
AA seq
DB search
MNKNEEILSKATPNFIYKFFTQPNSEETSKWLNSEINLICFSQMSAGANQTFLKVIDGSI
PPQYYAIVHLGIDDNGKATSYVKKMIRIENFSITNYYGKLFILAKKVTIFLNIDDFDIED
LFKKYHLQSISYFLLNSQNENNNSRNYSHINEYNNENNSRNICYQSREYDNENNSKNYDK
SNEYNENNLRSSYGNYRTPNDNFSKEHKLKGYNSNYNENSKNYHDTRVENNDKYMINQMQ
SQNRGNFMHNENSSYNNYSSNFNDYENKKEIIPSSQKKPVSCQVTSVYNRMNTNNYIDNN
SSDNENYNKNSHNINRNVKGNRINNYDPIHRNINNLREENSFQENIKNSSNIGNNSPNHF
YENELYEQERTNEYRNNNSMNSRNNFNTYDNNYNREYDNKTSMHKYVEEKEDLYYNKKMN
YSSNNEEESKIYANTNNHKQNNLVKISRSDESLNERYSPIDKNNNREILFSSLNNEDAMK
KIKSGSFDNLYEAKEKLHDNDVMDKKNDKMLKENALNRNIRKCSPYQNNAVIKINEGILM
PINKLSQYSSKWIIKARVQSKDNIRKFFSANKEGKVFNIELCDEDGEIKANFFGKAVDKW
YDFLEVGKIYKISKGNIKSANKKFNTLKHDCEITLDENSIIELLEENDSIPKFIYNFSSI
DNIKNMNTGSLVDVIGVVFSFQEIIQVLIKKTGQYKEKRDLVIIDDSNETINVTLWGEHA
LKVEENALKDNCIICFKYLKIGEWQGKKLESHPKTKIEINPDIEKACFLKSWWIDNKKSV
CSSINLNTNIFNLETQKTIEEIKKDVNLANEDTLSGKGIIFTTFGFIDHIYNSIPVYSAC
PDCNKKMTTNVVEDDIDSSPNSEESMYCSKCNKNNIPIYNYSINLKITDDTDSLRASAFA
NCAKTIMNGLSADEFMKLRQEYISQENIENFDIIEKVKLNEFFFRVKAYMTSHMDELKKN
YTILEIIPLNKVLVDNCKYLIKSIKNLTAKKESENE
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaacgaagagattttatcaaaggctacacctaattttatatataaatttttt
acacaacccaactcagaggaaacatcgaaatggttaaattcggaaataaatttgatttgt
tttagtcagatgagtgcaggagcaaatcaaacttttttaaaagtaatagatgggtcaata
ccacctcaatattatgctattgtacacttaggtatagatgataatggtaaagctacctcg
tatgtaaaaaaaatgattagaattgaaaatttttctattactaattattatggaaagctt
ttcattttagctaaaaaagttacaatctttttaaatatcgatgattttgatattgaagat
ctgtttaaaaagtaccatttacaaagtatttcttattttcttttaaattcacaaaatgaa
aataataattcaagaaattattctcatataaatgaatacaataatgaaaataactcaaga
aatatttgctatcaatcaagagaatatgataatgaaaataattccaaaaattatgataag
tcaaatgaatataatgagaataatttaagaagtagttatggtaattatcgtacaccaaat
gataatttttcaaaggaacataagttaaaaggttacaattcaaattataatgaaaattca
aaaaattatcatgatactcgagtagaaaataatgataaatatatgataaatcagatgcaa
tcacaaaatagaggaaattttatgcataatgaaaactctagttataataattattcatct
aattttaatgattatgaaaataaaaaagaaattataccatcttctcaaaaaaagccagtc
tcctgccaagtaacatctgtgtataacagaatgaacacaaataattatatcgataataac
tcatctgataatgaaaattataataaaaatagccataacataaatagaaatgttaaagga
aatagaattaataattatgatcctattcacagaaatataaataatttaagagaagaaaat
agttttcaagaaaatataaaaaatagttctaatattggtaataatagccctaatcatttt
tatgaaaatgagttgtatgaacaggaaaggacaaatgaatatagaaataataactcaatg
aattcgagaaataattttaatacttatgataataactacaatagagaatatgataataaa
acaagtatgcataagtatgtggaagaaaaagaagatttatattataataaaaagatgaat
tattctagtaataatgaagaagaatcaaagatatatgcaaatacaaacaatcacaagcag
aataatttagtaaaaataagtagaagcgatgaatcattaaatgaaagatattcccctatt
gataaaaataataatagagaaattttattttctagtttaaataatgaagatgcaatgaaa
aaaataaaaagcggaagttttgataatttgtatgaagcaaaagagaaattacatgacaac
gatgtaatggataaaaaaaatgacaaaatgttaaaggaaaatgcgttaaataggaatatt
agaaagtgttctccatatcaaaataatgctgtaataaaaataaatgaaggaattttaatg
cctataaataaattgtctcaatattcatcaaagtggattattaaagcaagggttcaatct
aaagataatataagaaaatttttttctgctaataaagaaggaaaagtattcaatatagaa
ttatgtgatgaagatggagaaataaaggcaaatttttttgggaaagcagtggacaaatgg
tatgattttttagaagtaggaaaaatttataaaataagtaaaggaaatataaaatcggca
aacaaaaaatttaatactctaaagcatgattgtgaaattacattagatgagaattccatt
atagaattattagaagaaaatgatagcattcccaaatttatttataatttttcatcaatt
gataatatcaaaaatatgaacacaggatctttagttgatgtcattggtgttgtatttagc
tttcaagaaataattcaagtgctaataaaaaaaacagggcaatataaggaaaaaagagat
ttagttataatagatgatagcaatgaaacaataaatgtcacattatggggggagcatgct
ttaaaagtagaagaaaatgctttaaaagataattgtattatttgttttaagtatttaaaa
attggagaatggcaaggaaaaaaattagaatcacatccaaaaacaaaaattgagattaat
cctgatattgaaaaggcttgttttttaaaaagttggtggatagataataagaaaagtgtt
tgcagctctatcaatttaaataccaatatctttaatttagaaactcaaaaaacaattgaa
gaaataaaaaaagatgttaatttagcaaatgaagataccttatcaggaaagggtatcatt
tttacaacttttggttttattgatcatatttataattctattcctgtttattcagcttgc
cctgattgcaacaaaaagatgactactaatgtagttgaagatgatatagattcatcccca
aattcggaagaatcaatgtattgttctaaatgtaacaaaaataatattccaatttataat
tattctattaatttaaaaattactgacgatactgactcattaagagcttctgcttttgct
aattgcgcaaaaacaattatgaatggattatctgctgatgagtttatgaagctgaggcag
gagtatatttcacaagaaaatattgaaaattttgacataatagaaaaagtaaaattaaat
gaatttttttttcgtgttaaagcttatatgacttctcatatggatgaattaaaaaaaaat
tatactattttagaaatcattccattaaacaaagttttagtagataattgtaaatattta
attaaatctattaaaaatttaactgcaaaaaaggaatcagaaaatgaataa
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