KEGG   Plasmodium relictum: PRELSG_0400400
Entry
PRELSG_0400400    CDS       T09405                                 
Name
(RefSeq) replication factor C subunit 1, putative
  KO
K10754  replication factor C subunit 1
Organism
prel  Plasmodium relictum
Pathway
prel03030  DNA replication
prel03410  Base excision repair
prel03420  Nucleotide excision repair
prel03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:prel00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PRELSG_0400400
   03410 Base excision repair
    PRELSG_0400400
   03420 Nucleotide excision repair
    PRELSG_0400400
   03430 Mismatch repair
    PRELSG_0400400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:prel03032]
    PRELSG_0400400
   03400 DNA repair and recombination proteins [BR:prel03400]
    PRELSG_0400400
DNA replication proteins [BR:prel03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    PRELSG_0400400
DNA repair and recombination proteins [BR:prel03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     PRELSG_0400400
SSDB
Motif
Pfam: RFC1 BRCT AAA Rad17 AAA_assoc_2 AAA_30 DNAX_ATPase_lid AAA_22 BRCT_2 Sigma54_activ_2 RCF1-5-like_lid AAA_16 AAA_6 AAA_18 RuvB_N AAA_19 SRP54 PTCB-BRCT AAA_33 AAA_5 VD10_N
Other DBs
NCBI-GeneID: 39734753
NCBI-ProteinID: XP_028531665
UniProt: A0A1J1H127
LinkDB
Position
4:37900..40503
AA seq 867 aa
MSSTGKKPFNDDSNEYGRKKKRLKKLASNLFDDDDYEEKEISNKNNDEIKDNNKEDNLYE
KKVLNKTSYDIKSYFKSSSKDIEEKSSIKKSNTSDNKVAVKNVNDYFNILQKGNKNIKSE
DINSNVKKEREENDIISEDGNKKKFISPEKNKTKDENNQNLPSFDYLPFNNQKFVLTGVF
KKFSRDELQSKIKEHGGSVMTAVSTKTHYLIHGEYLEDGRLYNEGRKYLKAFELQQQKKS
NIKILNEEEFLKLLPEEKKDDHISTVNETGKQEITKNEKSDISNEISTDTNYKTNKTGNN
EVDNEKILNQLWVEKYKPKNIDELVGNNQNVLKLQNWLANWEDVCIKGIKREVKKTFRGI
FENVNARCALLSGPAGIGKTTTAKLVSEQSGYNVIEFNASDERNKAAVERISEMATGGYS
ITSINNRKLTKTCIIMDEVDGMSSGDKGGSTAILKLIEKTKCPIICICNDRQNNKMRTLA
NKCYDLKFTLPQKNSVVKRLLEICNKEKIMMEPNALELLWESTHGDMRQMLNTLQLLSKT
YTRIQFLDLKKELNNSNKNVQSLANPFEITLKLLNFHESSKLKIREIMDLFFVDYELIPY
FISENYTNVFNDNDKSAGSLNKWNAYSQIAYDLSLADKIKYNMKSTMDFSLLPHFCILSC
VCPVMRIKLLKSFMSGRVNFPSAFGKISTFNKNKRLLNELCFNLSYKLNVCPKYMVTSGF
LNYIYFKIMTPLLKNNTNETITFMEDYNITREMITEHLPSLRLSNQENLYEKLDSKVKSS
FTRLYNASHVIKNDPNSLRKTFKLNEKTNIFKINEYGSDEDIDNLSDTKEEKDDDLLIKS
KIDKKSTMKIKSATKPKAVNKNIKKKK
NT seq 2604 nt   +upstreamnt  +downstreamnt
atgagttcaacaggaaaaaagccatttaatgatgatagtaacgaatatggaagaaaaaag
aaacgcttaaaaaagctagcaagtaatttattcgatgatgatgattatgaagaaaaagaa
atatccaataaaaataatgatgaaataaaagataataataaagaagataatttatatgaa
aaaaaggtattaaataaaactagttatgatataaaatcatactttaaatctagttcaaaa
gatatagaagaaaaaagttcaataaaaaaatcaaatacaagcgataataaagttgctgtg
aaaaatgtaaatgattattttaacatactacagaaaggaaataaaaatataaaaagtgaa
gatataaattctaatgtaaaaaaagaaagggaagaaaatgatataataagtgaagacgga
aataaaaaaaaatttatatcaccagaaaaaaataagacaaaagacgagaataatcaaaac
ttaccaagttttgattatttaccatttaataatcaaaaatttgtattaacaggagtattt
aaaaaattttcaagagatgaactgcaatccaaaataaaggaacatggaggaagtgtaatg
acagctgtatcaacaaaaacacattatctaattcatggagaatacctagaagatggaaga
ctatataatgaaggaagaaagtatttaaaagcatttgaattacaacaacaaaaaaaatca
aatattaaaatattaaacgaagaagaatttttaaaattgcttccggaggaaaaaaaagat
gatcatatttcaactgttaatgaaacaggaaaacaagaaattacaaaaaatgaaaaaagt
gatatatcaaatgaaatatctacagatactaattataaaacaaataaaactggaaacaat
gaagtggacaatgaaaaaatccttaatcagttatgggttgaaaaatacaaacctaaaaat
atagatgaactagtaggaaataatcaaaacgttttaaaattgcaaaactggttagctaac
tgggaagatgtatgtattaagggaataaaaagagaagtaaaaaaaacattccgaggaatt
tttgaaaatgtaaacgctcgatgtgctttattaagtggacctgcaggaattgggaaaaca
actacggcaaagctggtatctgaacaatctggttataatgtcattgagtttaatgcgtca
gatgagagaaataaggctgcggttgaaagaattagtgaaatggcaacaggtggttattct
ataacttcaataaataatcgtaaattaacaaaaacttgtattattatggatgaagtagat
ggtatgtcaagcggtgacaaaggtggaagtacagcaattttaaaattaatagaaaaaaca
aaatgtcctattatatgtatatgtaatgatagacaaaataataagatgagaactctagct
aataaatgttatgatttaaaatttaccttgcctcaaaaaaatagtgttgttaaaagactg
ttagaaatatgtaataaagaaaaaattatgatggaaccaaatgctttagaattattatgg
gaaagtactcatggggatatgaggcaaatgctaaatactctacaactattatctaaaact
tatacaagaattcaatttttagatttgaaaaaagaacttaataattccaataagaatgta
caatctttagctaatccatttgaaataacacttaagctcttaaattttcatgaatcatca
aaattaaaaataagagaaataatggatttattttttgttgattatgaattaatcccatat
tttattagtgaaaattacactaatgtttttaatgacaatgataaatcagcaggttcttta
aataaatggaatgcatattctcaaatagcttatgatctatctttggctgataaaataaaa
tataatatgaaaagtactatggatttctccttattgccacatttttgcattttatcttgt
gtgtgcccagttatgcgaataaaactactaaaatcttttatgtcaggtagagttaacttt
ccttcagcatttggaaagatttctacttttaataaaaataaaagattacttaatgaatta
tgttttaatttatcatataaacttaatgtatgcccaaaatatatggttacctctggattt
ttaaattatatatactttaaaattatgactccattacttaaaaataatacaaatgaaaca
ataacatttatggaagattacaatattacaagagaaatgataaccgaacatttaccctct
ctaagattatcaaatcaagaaaacttatacgagaaacttgattcaaaagtaaagtcttca
tttactcgtttatataatgcttctcatgttattaaaaatgatcctaattctttaagaaag
acttttaaattaaatgaaaaaactaatatctttaaaattaatgagtatggatccgatgaa
gacatagacaacttaagtgacacaaaagaagaaaaagatgatgatttattaattaaaagt
aagatagataaaaagagtactatgaaaattaaatctgcaacgaaacccaaagcagttaac
aaaaatataaaaaaaaaaaaataa

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