Plasmodium relictum: PRELSG_0501000
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Entry
PRELSG_0501000 CDS
T09405
Name
(RefSeq) U5 snrnp-specific protein, putative
KO
K12857
Prp8 binding protein
Organism
prel
Plasmodium relictum
Pathway
prel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PRELSG_0501000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prel03041
]
PRELSG_0501000
Spliceosome [BR:
prel03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
PRELSG_0501000
Complex C
U5 SnRNP specific factors
PRELSG_0501000
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GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
WD40_like
eIF2A
Nup160
RMC1_N
Motif
Other DBs
NCBI-GeneID:
39734953
NCBI-ProteinID:
XP_028531861
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All DBs
Position
5:complement(35358..36329)
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AA seq
323 aa
AA seq
DB search
MAIVKSNMYSLQKEENEIEERKTGLYFPNMLINTHKGEVYSINFSSDGRFIASSSFDMTI
MIHNVYNECETTNVLRGHKNAVLQAKWSKDDSYICSASADHNLCLWDIENESKIKSFKGH
TSIVNALDIINYNLFVSCSDDCTLKFWDFRSKKSIHTIKHDFPLLAVCSDKKGEFIYTSC
VDNTIKIYDSKSYKLKDILTGHKDYISGLDINNDETMLASISVDETICFWDIQPFSCDEK
LLFNLKAPKYNVDYNLIKLRFNNDNLLACGSGDNYLYIYDYKQKILKYSLPGHHSTINDV
AFHPLEEIVASCSSDHTIFLGEF
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggctattgtaaaatcaaatatgtatagtttgcaaaaggaagaaaatgaaattgaagaa
agaaaaacaggcttatattttccgaatatgttaataaatactcataaaggtgaagtttat
tcaattaatttttcttcagatggaagatttattgcttcatcgagttttgatatgactata
atgattcataatgtatacaatgaatgtgaaacaactaatgttttaagaggtcataaaaat
gcagtattacaagcaaaatggtcaaaagacgatagttatatatgcagtgcatcagctgac
cataatttatgtttatgggatatagaaaatgaatcaaaaataaaaagttttaaaggccat
acaagtatagttaatgctctagatataattaattataacttatttgtttcatgcagtgat
gactgcactctgaaattttgggattttagaagtaaaaaatcaatccatactattaaacat
gattttcctttattggctgtctgctcagataaaaagggagaatttatttataccagttgt
gttgataatactataaaaatttatgatagtaagagttataaattaaaagatatattaact
gggcataaagattatataagtggattagatataaataacgatgaaactatgttagcttct
attagtgtagatgaaactatatgtttttgggatattcagccattttcttgtgatgaaaaa
ttattatttaatttgaaagcaccaaaatataatgtcgattataatttaattaaattaaga
tttaacaatgacaatttattagcatgtggaagtggagataattatttatatatttatgat
tataaacaaaaaattttaaaatattctttaccaggacatcatagtactataaatgatgtt
gcttttcatcctttagaagaaatagttgcttcctgttcatctgatcatacaattttttta
ggggaattttaa
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