KEGG   Plasmodium relictum: PRELSG_0501000
Entry
PRELSG_0501000    CDS       T09405                                 
Name
(RefSeq) U5 snrnp-specific protein, putative
  KO
K12857  Prp8 binding protein
Organism
prel  Plasmodium relictum
Pathway
prel03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:prel00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PRELSG_0501000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:prel03041]
    PRELSG_0501000
Spliceosome [BR:prel03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    PRELSG_0501000
 Complex C
   U5 SnRNP specific factors
    PRELSG_0501000
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_EIPR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_RIG_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_HPS5 WD40_like WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st eIF2A WD_LRWD1 RMC1_N
Other DBs
NCBI-GeneID: 39734953
NCBI-ProteinID: XP_028531861
UniProt: A0A1J1H5Z3
LinkDB
Position
5:complement(35358..36329)
AA seq 323 aa
MAIVKSNMYSLQKEENEIEERKTGLYFPNMLINTHKGEVYSINFSSDGRFIASSSFDMTI
MIHNVYNECETTNVLRGHKNAVLQAKWSKDDSYICSASADHNLCLWDIENESKIKSFKGH
TSIVNALDIINYNLFVSCSDDCTLKFWDFRSKKSIHTIKHDFPLLAVCSDKKGEFIYTSC
VDNTIKIYDSKSYKLKDILTGHKDYISGLDINNDETMLASISVDETICFWDIQPFSCDEK
LLFNLKAPKYNVDYNLIKLRFNNDNLLACGSGDNYLYIYDYKQKILKYSLPGHHSTINDV
AFHPLEEIVASCSSDHTIFLGEF
NT seq 972 nt   +upstreamnt  +downstreamnt
atggctattgtaaaatcaaatatgtatagtttgcaaaaggaagaaaatgaaattgaagaa
agaaaaacaggcttatattttccgaatatgttaataaatactcataaaggtgaagtttat
tcaattaatttttcttcagatggaagatttattgcttcatcgagttttgatatgactata
atgattcataatgtatacaatgaatgtgaaacaactaatgttttaagaggtcataaaaat
gcagtattacaagcaaaatggtcaaaagacgatagttatatatgcagtgcatcagctgac
cataatttatgtttatgggatatagaaaatgaatcaaaaataaaaagttttaaaggccat
acaagtatagttaatgctctagatataattaattataacttatttgtttcatgcagtgat
gactgcactctgaaattttgggattttagaagtaaaaaatcaatccatactattaaacat
gattttcctttattggctgtctgctcagataaaaagggagaatttatttataccagttgt
gttgataatactataaaaatttatgatagtaagagttataaattaaaagatatattaact
gggcataaagattatataagtggattagatataaataacgatgaaactatgttagcttct
attagtgtagatgaaactatatgtttttgggatattcagccattttcttgtgatgaaaaa
ttattatttaatttgaaagcaccaaaatataatgtcgattataatttaattaaattaaga
tttaacaatgacaatttattagcatgtggaagtggagataattatttatatatttatgat
tataaacaaaaaattttaaaatattctttaccaggacatcatagtactataaatgatgtt
gcttttcatcctttagaagaaatagttgcttcctgttcatctgatcatacaattttttta
ggggaattttaa

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