Plasmodium relictum: PRELSG_0502300
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Entry
PRELSG_0502300 CDS
T09405
Name
(RefSeq) clp1-related protein, putative
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
prel
Plasmodium relictum
Pathway
prel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
prel00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PRELSG_0502300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prel03019
]
PRELSG_0502300
Enzymes [BR:
prel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
PRELSG_0502300
Messenger RNA biogenesis [BR:
prel03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
PRELSG_0502300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_N
CLP1_P
Clp1
nSTAND3
Motif
Other DBs
NCBI-GeneID:
39734966
NCBI-ProteinID:
XP_028531874
UniProt:
A0A1J1H5J2
LinkDB
All DBs
Position
5:complement(69746..71407)
Genome browser
AA seq
553 aa
AA seq
DB search
MTTTNNTRIYNLKAFRELRIVTLEKATKFDEKEECIKIRILSNTNLNKNEKNTCTAEIFG
RELILDKDYYFGFNEKFSIYTYTGCIIQIKGKTLQEYESKNTTMKDYLSLSYIFDAYRKL
AKKKKKVGPRILITGNNNSGKSSVSLLLCNYALKSGFKPIFIETDTKCSCDKIELNNGPG
IMSCFVYDNMNMKYSLDFFFGYLDINEDINLYYHINECLSSCIHLMLLNNLNFQSTNFKN
NTEQEIIHSSGFILNVPSEADHKIIENLIEIYNINIVVVIDNSFLHYSLKEHYNKIDANN
SEGVNCGSILNNNNNKGTDFNNDDNNLNNHDSNHNDNSNNNNNNVADNNNEKIKNSNNYN
NVNNNNNDNNKNKNINNDKIRNVEIIGMPKFEGVIPSDNNRLRYCRNLWFYNYFSKDIYV
NGNVYKKSHILNFKYSSTNFVKLDTNSAVPLSALPADCKNKKIENVSVSLYNSNIKNLIN
CILGVSYSKDFLYVHLMNIAAFVHVQNIKEIESEENEENKNDYLIEILCPVSITSNNIPP
YFIVPGNIKQIKF
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgactactacaaacaatacaaggatatacaatttgaaagcttttcgagaattacgaatt
gttacattagaaaaagccactaaatttgatgaaaaagaagaatgtataaaaattagaatt
ttatctaataccaatttgaataaaaatgaaaagaatacttgtacagcagaaatatttggt
agagaactaatattagataaagattactattttggatttaatgaaaaattttcaatttat
acttatactggatgtattattcaaataaaaggaaaaacattacaagaatatgaaagtaaa
aatactacaatgaaggattatttatctttatcatatatttttgatgcttatagaaagtta
gcgaaaaaaaaaaaaaaagttggtcctcgtatattaattactggaaacaataattcagga
aaaagctctgtttctttgttactatgcaattatgcattaaagtcaggatttaaaccaatt
tttattgaaactgatacaaaatgtagttgtgataaaatagagttaaataatggccctgga
attatgagctgttttgtttatgataatatgaatatgaaatactcacttgatttttttttt
ggttatttagatattaatgaagatataaatttatattaccatattaatgaatgtttaagt
agttgtatacatttaatgttgttgaataatttaaattttcagtcaaccaattttaaaaac
aacacagaacaagaaataatacattcatctggatttattttaaatgttccttcagaagca
gatcacaaaattattgaaaatttaatagaaatttataatattaatattgttgttgttatc
gacaattcttttcttcattattcattgaaagaacattacaacaaaattgatgcaaataat
tctgaaggagtaaattgtggtagcatattaaataataacaataataagggtactgatttt
aataatgatgataacaatttaaataaccatgatagtaatcataatgataatagtaataat
aataataataatgttgcagataataataatgaaaaaattaaaaatagcaacaactataac
aatgtaaataataataataatgataacaataaaaacaaaaatattaataatgataaaata
agaaatgttgaaattataggaatgcctaaatttgaaggagtaatcccttctgataataat
cgactaaggtattgtagaaatttatggttttataattatttttcaaaagatatatatgtt
aatggtaatgtatataaaaagagtcatatattaaattttaaatatagttcaactaatttt
gtaaaactagataccaactcagccgttcccttatctgctttaccagcagattgtaaaaat
aagaaaatagaaaatgtatcagttagtttatacaatagcaatattaaaaatttaataaat
tgcattttaggtgtttcttattctaaagattttctttatgttcatcttatgaacatagct
gcttttgttcatgtgcagaatataaaagaaattgaaagtgaagaaaatgaagaaaataaa
aatgattatttaattgaaattctatgcccagtttccataacatcaaataatattccacca
tattttatagtccctggaaacattaaacaaattaaattttaa
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