Plasmodium relictum: PRELSG_0502500
Help
Entry
PRELSG_0502500 CDS
T09405
Name
(RefSeq) ATP-dependent RNA helicase prh1, putative
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
prel
Plasmodium relictum
Pathway
prel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PRELSG_0502500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prel03019
]
PRELSG_0502500
03012 Translation factors [BR:
prel03012
]
PRELSG_0502500
Enzymes [BR:
prel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PRELSG_0502500
Messenger RNA biogenesis [BR:
prel03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
PRELSG_0502500
Translation factors [BR:
prel03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
PRELSG_0502500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_11
nSTAND3
AAA_22
ResIII
AAA_19
NPHP3_N
AAA_14
Viral_helicase1
Sigma54_activat
TsaE
Motif
Other DBs
NCBI-GeneID:
39734968
NCBI-ProteinID:
XP_028531876
UniProt:
A0A1J1H1Y2
LinkDB
All DBs
Position
5:77300..80019
Genome browser
AA seq
812 aa
AA seq
DB search
MNELPILKYKDEIKRLLKENNLVIIKGETGCGKTTQVPQIINDIYFNNKKNELNKKKNDN
KKKKKKMLISLPRKVATITVAERVAKEMNRGEVGSYVGYTIRFKNVCSKETRIKFVTDGI
LIREIMNNPLLKKYKFLILDEIHERSIRTDVLLGYTKILLEKRKNLKIILMSATFDINIF
NHFFNNPPIISIPHKLHKITIFYPKKTIEDYLLSIVCTILQIHFGNSHIKSEGNIYYSTF
ENDNDEKYSIQQNEKEKENEQDDSVIDKQDFIREKKKKKDSLGDILVFLPGQEEIEMVNI
MLKEKLKIIYKGTLLSKLISNENQNQDNQFLNKMNRVLNADNQIINDICFHFGTTEIIPD
KIYTMKILQLYSSLPNKKQRIIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKI
KFFDSKRGSNVLKVTQISKDSAIQRSGRAGREGPGKVFRIYTKEEYENMHPFLIPEIFRS
DLTQIYLELKAMNIKNPLEFEFPENPKKEFFVHSAKMLYKINAIDINNNLTDLGKKLCLF
PLNPIYANILLCSIEFNCIDEIATIIALLNCDSIFLNYNFYDDLIIINEELSKNNNEFKE
RKQNNKDALKEKKQDKKMKIKSEDEDEDADEENREELKANDKSKLVNVARRKLIHPDGDH
LTLLHIFYLWNEASTNERKHFCNIYALNNEVLLQVEKIKIQLLEIIKNKMKVNISKKLHM
HKWEKVLICLCKSCFFNIARLTSNTNVYINLVNKTKIRIHPSSTLFNSFIKPSFIFYSDV
VQTKRLYARIVTKIEADWLLKYVSQKFQLKKN
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaattacctattttgaaatataaagatgaaattaaaagattgttaaaagaaaat
aatttagtaataataaaaggagaaacaggatgtggaaaaaccactcaagtacctcaaata
ataaatgacatatattttaataataaaaaaaacgaacttaataaaaaaaaaaatgataat
aaaaaaaaaaaaaagaaaatgctaatatctcttccaagaaaagtggcaacgataactgtt
gctgaaagagtagcaaaagaaatgaatagaggtgaagttggtagttatgttggttatact
ataagattcaaaaacgtatgctcaaaagagactagaattaagtttgttactgatggaata
ttaattagagaaattatgaataatcccttactaaagaaatataaatttttaattctggat
gaaatacatgagagatctattagaactgatgttttattaggttataccaaaattttgtta
gagaaaagaaaaaatttaaaaattattcttatgtctgctacttttgatatcaatatattt
aatcatttttttaataatcctcctatcatttctattcctcataaacttcataaaattaca
attttttatccgaagaaaacaatagaagattatctcctttctattgtatgcactattttg
caaatccattttggtaattctcatataaaaagtgaaggaaatatatactattctacattt
gaaaatgacaatgatgaaaaatacagtattcaacaaaatgagaaagaaaaagaaaatgag
caagatgatagtgttatagataagcaggattttattagagagaaaaaaaaaaaaaaagat
agcttaggagatattttggtttttcttccagggcaagaagaaatagaaatggtaaatatc
atgttaaaagaaaaattaaaaataatatacaagggaactttattaagcaaattgattagc
aacgaaaatcaaaatcaagataatcaattcttaaataaaatgaatagagtattaaatgca
gataatcaaattattaatgacatttgttttcattttggtacaactgaaattataccagat
aaaatatatactatgaaaattttgcagttgtattcatcacttcctaataaaaagcagagg
ataatatttgaacctgttccacctaatacaagaaaagttattttgagtacaaatattgca
gaaacatctgttacaattccaaatataaaatatgtaatagacagcggtaaagtaaaaata
aaattttttgattctaaaagaggaagcaatgttttaaaggttactcaaatatccaaagac
tcagctatacaaagaagtggaagagcaggaagagaaggccctggaaaagtttttaggata
tatacaaaagaagaatatgaaaatatgcatccctttttaattcctgaaatttttcgttct
gaccttacacaaatttacttggaattaaaagcaatgaatataaaaaatccattagaattt
gaatttcctgaaaatcctaaaaaagaattttttgttcattcagccaaaatgctatataaa
ataaatgcaattgatataaataataatttaactgatttaggaaaaaaattgtgtttattc
ccattaaatcctatatatgcaaatatattgttgtgttctattgaatttaattgcatagat
gagattgcaaccattatagccttattaaattgcgacagtatttttttaaattataatttt
tatgatgatttaattattatcaatgaagagctatcaaaaaataataatgaatttaaagaa
agaaaacaaaacaataaggatgcgttaaaagaaaaaaagcaagataaaaaaatgaaaatt
aaaagtgaagatgaagatgaagatgcagatgaagaaaatagagaagaattaaaagcaaat
gataaaagtaaattagttaacgttgcaagaagaaaacttattcatccagatggtgatcat
ttaactttattacatattttttatttatggaatgaagcatctactaatgaaaggaaacac
ttttgcaatatatatgccttaaacaatgaagtattactacaagtcgaaaaaattaaaatt
caattattagaaattataaaaaataaaatgaaagtaaatatttcaaaaaaattgcatatg
cataaatgggaaaaggttttaatatgcttatgcaaatcatgttttttcaatatagctaga
ctaacatcaaacacaaatgtttacataaatttagtgaataaaactaaaatacgtatacat
ccatcatctactctttttaattcttttatcaaaccttcttttattttttactccgatgta
gttcaaacaaaaagattgtatgctcgcattgttacaaaaattgaagcagattggttacta
aaatatgtatcacaaaaatttcaattaaaaaaaaactag
DBGET
integrated database retrieval system
