Plasmodium relictum: PRELSG_0613800
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Entry
PRELSG_0613800 CDS
T09405
Symbol
PRP22
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22, putative
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
prel
Plasmodium relictum
Pathway
prel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PRELSG_0613800 (PRP22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prel03041
]
PRELSG_0613800 (PRP22)
Enzymes [BR:
prel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PRELSG_0613800 (PRP22)
Spliceosome [BR:
prel03041
]
Complex C
Other components
Step II factors
PRELSG_0613800 (PRP22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
DEAD
AAA_22
S1
AAA_19
PhoH
Sigma54_activ_2
T2SSE
nSTAND_NTPase5
GIPC1_GH2
Motif
Other DBs
NCBI-GeneID:
39735264
NCBI-ProteinID:
XP_028532171
UniProt:
A0A1J1H2N4
LinkDB
All DBs
Position
6:complement(544138..548538)
Genome browser
AA seq
1251 aa
AA seq
DB search
MDCLNKINLIHKVNTELYNSLGIEDDNLAEFLIYLCNKSKSLEEFCKDVFENGGEIEHSV
LKYLYDVIKSSSKDVEASKKENKEATSEKNIESKEYEQIEKKNEKMKKYYCLTIKNENFN
KEPDENLKKKEDNQINYNNEDKSNSNKLNDTDSLYEKRKKNNNNRLSDSDSSYKKRKKKN
NNRLSDSDSSYVKRRKKNNNRLNDSDSSYVKRRKKNNNNRLNDSDSSYKKRKKKNNNRLN
DSDSSYEKRREKNHKNEKSYNYASSHKDYSEDKKRKHKHEKNYANDNSLKINNIFNGSIS
KIMDFGIFVSFKTIEGYKEGLVHATDILPNRKRLLNINEKFKRNMKVKVKVKGIFGEKIS
LNMSEVDQKTGKNLVNDEEKSENYGSLFDDIDEDYKELKKNKADIFREDPNEIMKYESVI
KMQSDYSKWEIQQLMKSGAIYDENLKKEYKNLKMDEKIEDEEEVIEIEVNEREPSFLKGQ
TTKAGAKLSPIEIIVNAEGSLARAITTTSALAKERKEQKQNEQNAIFDSIPKDISRPWED
PKPNLGERTIAEALKNIGKNYDLPEWRKIYMNNNISVGVKNSLPLNEQRLKLPIYKLKDD
LMKAIQKNNVLIVIGETGSGKTTQIPQYLHEANYTANGIIGCTQPRRVAAMSIAKRVSEE
FGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTMLTKYSFIILDEAHERTIS
TDILFCLLKDVVRKRSDFKLIVTSATLDAEKFSTYFFNSPIFTIPGKIFPVEILHSKEPE
SDYVEASLITVLNIHLNEHPGDILVFLTGQEEINTACEILHERMKKLESMCPPPLIILPI
YSSLPSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKVKKYDSKRDMD
SLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMAETSVPEIQRINLGSIVLLL
KALGVNDFLHFDFMDSPSIETLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEPNLSKI
LLTSINFNCADDVVTIVSMLSVQNIFYRPQNKALLADKKKNKFVMPQGDLITYLNIYNKW
KENSLSNYWCHENFIHSRALKRAQDVRKQLLSIFEKYNYEVKKNTSKNDSTRYVNICKSI
CSGYFNHVCKRDSQQGYTTLLTNQQVFIHPSSTLFNKNPLFVVYHELVLTNKEYIRDCTI
IQPQWLIQLAPNLFIPADEKKISKIKLREKIEPLHNYYEEPNAWRLSRRKG
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggattgtttaaataaaataaatttaattcataaagtgaatacagaattatataatagt
ttaggtatagaagatgacaatttagcagaatttttaatttatttgtgtaataaatctaaa
tcattagaagaattttgcaaagatgtttttgaaaatggtggggaaatagaacattctgtt
cttaaatatttatatgatgtcataaaaagttcttcgaaggatgttgaagcgtcaaagaaa
gaaaataaagaagcaacttcagaaaaaaatattgaatcaaaagaatatgaacaaatagaa
aaaaaaaatgaaaaaatgaaaaaatattattgtttaactataaagaacgaaaatttcaat
aaagagccagacgaaaatttgaaaaaaaaagaagataatcagataaattataataatgaa
gataaatccaatagcaataaattaaatgatactgattctttatatgaaaaaagaaaaaaa
aataataataatagattaagtgatagtgattcttcatataaaaaaagaaaaaaaaaaaat
aataatagattaagtgatagtgattcatcatatgtaaaaagaagaaaaaaaaataataat
agattaaatgatagtgattcatcatatgtaaaaagaagaaaaaaaaataataataataga
ttaaatgatagtgattcttcatataaaaaaagaaaaaaaaaaaataataatagattaaat
gatagtgattcatcatatgaaaaaagaagagagaaaaatcataaaaatgaaaaaagttat
aattatgcttcttctcataaagattatagcgaagataaaaaaagaaaacataaacatgag
aaaaattatgcaaatgataattctttaaaaattaataatatttttaatggtagtataagt
aaaataatggatttcggaatttttgtttcctttaaaacaatagaaggctacaaagaaggc
ttagttcatgctactgatatattgccaaatcgtaaaaggttattaaatataaatgaaaaa
tttaaaagaaatatgaaagttaaagtaaaagtaaaaggaatatttggagaaaaaattagt
ttgaatatgtcagaagtagatcaaaagacaggaaaaaatttggtaaatgatgaagaaaaa
agtgaaaattatggttcattatttgatgatatagatgaagattacaaagaattaaaaaaa
aataaagcagacatttttagagaagatccaaatgaaataatgaaatatgaaagtgtcata
aaaatgcaaagtgattattctaaatgggaaattcaacagctaatgaaaagtggggcaata
tatgatgaaaatctcaagaaggaatataagaatttaaaaatggatgaaaaaattgaagat
gaagaggaagttatagaaattgaagttaatgaaagagagccttcttttttaaaagggcaa
acaacaaaagctggagcaaagttgtcaccaattgaaattattgttaatgctgaaggatct
cttgctagggcaataacaactacatcagcattagcaaaagaaagaaaagaacaaaagcaa
aatgagcaaaatgcaatttttgatagtattccaaaagatattagtagaccatgggaagat
ccaaagccaaatttaggagaaagaacaatagctgaagcattaaagaatattgggaaaaat
tatgacttacctgaatggagaaaaatttatatgaacaataatatatctgttggtgtgaaa
aattctttaccacttaatgagcaaagattaaaattacctatatataaattaaaagatgat
ttaatgaaagcgattcaaaaaaacaatgttcttattgtaattggagaaacaggtagtgga
aagacaacccaaatacctcaatatttacatgaagcaaattatacagccaatggaattatt
ggatgcacacagccaagaagagttgcagctatgtcaattgctaaaagggtgagcgaagaa
ttcggatgcattttaggccaagaagtcggttattccattcgttttgatgattgtacatcc
aatgatactattataaaatatttaactgatggtatgctattgcgagaaacattgagtgat
acaatgttaacaaagtattcatttattatacttgatgaagctcatgaaagaacaatttca
acagatatccttttttgtcttttaaaggatgttgttagaaaaagatctgattttaaatta
atagtaacatcagctactcttgatgctgaaaagttttctacatatttttttaattctcca
atttttactattccaggaaaaatatttcctgtggagatactacattctaaagaaccagaa
agtgattatgtagaagcaagtttaataacagttttgaatattcacttaaatgaacaccca
ggcgatattttagtttttttgacaggccaagaggaaattaatacagcatgtgaaatttta
catgaacgtatgaaaaaattagagagtatgtgtcctccacctttaattattctacctata
tattcatccttgccatcagaaatgcagagcgtaatctttgagcctgcacctccaggatgt
aggaagtgtatcttagctacaaatatagcagaagcaagtttaactattgatggaatattt
tttgttatcgatccagggttttgtaaagtaaaaaaatatgactctaagagagatatggat
tctttaatagttgccccaatttctaaagctaatgctaaacaaagagctggtcgtgcaggt
agaacaggaccaggaaaatgctatcggctatatactgaagaagcatataaaaatgaaatg
gcagaaactagtgtaccagaaatacaaagaattaatttaggtagtattgtattattatta
aaggctttaggagttaacgattttttacactttgatttcatggattctccatcaattgaa
actcttatacactctctagaaaatttatattatttaggtgcattagacgataatggctat
ttaacaaaattaggaaaaaaaatggcaaatttccctatggaacctaatttatcaaaaatt
ttattaacatcaattaatttcaattgtgctgatgatgtagttactatagttagtatgctc
agtgtacaaaatattttttatcgccctcaaaataaagcattattagcggataaaaaaaaa
aataaatttgtaatgccacaaggggatcttattacttacttaaatatatacaataagtgg
aaggaaaatagtctttctaactattggtgtcacgaaaattttattcattcaagagcctta
aaaagagcacaagatgtaagaaaacaattgctgtctatatttgaaaaatataattatgaa
gttaaaaaaaatacaagtaaaaatgattccacaagatatgtgaatatatgtaaaagtatt
tgttctggttatttcaatcatgtttgtaaaagagatagtcaacaaggatacactactctt
ttaactaaccagcaagtttttattcatccttcatcaactctttttaataaaaatccatta
tttgtagtatatcatgaattagttttaacaaataaagaatatataagagactgcactata
attcaacctcaatggttaatacaattagcacccaacttatttattccagcagatgaaaaa
aaaatatcaaagattaaattaagagaaaaaattgagccattgcataattattatgaagaa
cctaatgcttggaggttgtctagaagaaaaggataa
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