Plasmodium relictum: PRELSG_0817300
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Entry
PRELSG_0817300 CDS
T09405
Symbol
DOZI
Name
(RefSeq) ATP-dependent RNA helicase DDX6, putative
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
prel
Plasmodium relictum
Pathway
prel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PRELSG_0817300 (DOZI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prel03019
]
PRELSG_0817300 (DOZI)
03036 Chromosome and associated proteins [BR:
prel03036
]
PRELSG_0817300 (DOZI)
Enzymes [BR:
prel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PRELSG_0817300 (DOZI)
Messenger RNA biogenesis [BR:
prel03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
PRELSG_0817300 (DOZI)
mRNA degradation factors
5'-3' decay
Decapping complex
PRELSG_0817300 (DOZI)
Chromosome and associated proteins [BR:
prel03036
]
Eukaryotic type
Gene silencing
piRNA pathway
PRELSG_0817300 (DOZI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Arcadin_1
Motif
Other DBs
NCBI-GeneID:
39735849
NCBI-ProteinID:
XP_028532752
UniProt:
A0A1J1H5B7
LinkDB
All DBs
Position
8:complement(643613..645003)
Genome browser
AA seq
431 aa
AA seq
DB search
MNYQTNCTATNSNALNSSSNLNKIDENVIFDEAWKKRVLEPLKDRRYKTEDVTKTKGNEF
EDYFLKRELLMGIFEKGYEKPSPIQEESIPVALAGKNILARAKNGTGKTAAFAIPLLEKC
NTHKNFIQGLILVPTRELALQTSAMIKELGKHMKVQCMVTTGGTSLREDIMRLYNVVHIL
CGTPGRILDLANKDVANLSGCHIMVMDEADKLLSPEFQPIVEELMKFLPKEKQILMYSAT
FPVTVKEFRAIYLSDAHEINLMDELTLKGITQYYAFVKERQKVHCLNTLFAKLQINQAII
FCNSITRVELLAKKITELGYSSFYIHARMSQTHRNRVFHDFRNGACRCLVSSDLFTRGID
IQSVNVVINFDFPKNSETYLHRIGRSGRYGHLGLAINLITYEDRFNLYKIEIELGTEIHP
IPNEIDPSLYT
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaattatcaaactaattgtaccgctacaaactcaaatgctttgaatagttccagtaat
ttaaataaaatagatgaaaatgtaatatttgatgaagcttggaaaaaaagagtattagaa
ccattaaaagatcgtagatataaaacagaagatgtaacaaaaaccaaaggaaatgaattt
gaagattattttttaaaaagggaacttttaatgggaatatttgaaaaaggatatgaaaaa
ccatctcctatacaagaagaaagtatccccgttgctttggcaggaaagaatattttagct
agagcaaaaaatggaacagggaaaacagctgcttttgcaattcctttattagaaaaatgt
aacactcataaaaattttatccaaggattaatattagtaccgacaagagaattagcactg
cagacgtcagcaatgataaaagagttaggaaagcatatgaaagttcaatgcatggtaaca
actggtggaacatcattaagagaagatataatgagattatataacgttgttcatatatta
tgcgggactccaggtcgtatcttagatttagcaaataaagatgtggcaaatttatcagga
tgtcatataatggtaatggatgaagcagataaattattatctcctgaatttcaacctatt
gttgaagaattaatgaaatttttgcccaaggaaaagcaaattttaatgtattctgctact
ttcccagttacagtaaaagaatttagagccatttatctatctgatgctcatgagataaat
ttaatggatgaattaactttgaaaggaattactcagtattatgcttttgttaaggaaaga
caaaaagttcattgcttaaatactttatttgcaaaattacaaattaaccaagctattatt
ttttgtaatagtataactagagtagaattattagcaaaaaaaatcaccgaattaggttac
agctccttttatatccatgctagaatgtcacaaacacatagaaatcgagtttttcatgat
tttagaaacggggcttgtagatgtttggtttcttccgatctttttactagaggtattgat
atacaatcagttaatgttgtaattaattttgatttcccaaaaaattcagagacttattta
catagaattggtagatctggtagatatgggcatttaggattggctattaacttaattaca
tatgaagatcgttttaatttatataaaattgaaatagaattaggtacagaaatacatcct
attcctaatgaaatagatccatctttatatacgtaa
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