Plasmodium relictum: PRELSG_0916100
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Entry
PRELSG_0916100 CDS
T09405
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF small subunit, putative
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
prel
Plasmodium relictum
Pathway
prel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PRELSG_0916100 (U2AF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prel03041
]
PRELSG_0916100 (U2AF1)
Spliceosome [BR:
prel03041
]
Complex A
U2 snRNP components
U2 related factors
PRELSG_0916100 (U2AF1)
Complex B
PRELSG_0916100 (U2AF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
zf_CCCH_4
Torus
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
39736173
NCBI-ProteinID:
XP_028533066
UniProt:
A0A1J1H8Y3
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All DBs
Position
9:complement(545200..546132)
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AA seq
310 aa
AA seq
DB search
MAEHLARIIGTEEDRVNCPFFWKIGACRHGDQCSRSHYKPNCSQTLVIRHMYDNPPIAVA
IAEGQMVDDEVLDKAADHFEEFYEEVFEELMKYGEIEDMVVCDNIGDHIIGNVYIKYTHE
DYAEKAVKELNGRFYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVPRS
VKRKLYRRMYKKFPEYRKRRRRSDDSDDYHDGHRERGSKDKYKRDRYKENHHNGRRRNRS
KSNDYEDEDADRSCKYARRENSIERREKIERWNKEREMKNMLKNNKDNKKEEDEDDNNIK
DSKELDTRDD
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacatttagctcgtattataggaacagaagaagatagagtcaactgtccattt
ttttggaaaattggagcatgtcgtcatggagatcaatgtagtagaagtcattacaaacca
aactgttctcaaactttagttataagacatatgtatgataatccacccatagctgttgct
attgcagaaggacaaatggttgacgatgaagtattggataaagcagctgatcattttgaa
gaattttatgaagaagtttttgaagaattaatgaaatatggagaaattgaagacatggtt
gtttgtgataatataggggatcatattattggtaatgtttatattaaatatacacatgaa
gattatgctgagaaagctgttaaggaactaaacggacgattttatgcaggtaaaccgtta
caaattgaatacacacctgttactgattttagagaagccagatgcaggcaatttgtagat
ggccaatgcagaagaggaggatattgcaattttatgcatatcaaacatgttcctagaagt
gtgaaaagaaaattatatagaagaatgtataaaaaatttcctgaatatagaaaaagaaga
aggagaagtgatgattcagatgattatcacgatggccatagagaaagaggtagtaaagat
aaatataaaagagacagatataaggaaaatcatcataatggtaggcgtagaaataggagt
aaaagtaatgattatgaggatgaagatgctgataggagttgtaaatatgcaaggagagaa
aacagtatagaaagaagagagaaaattgaaagatggaataaggaaagagaaatgaaaaat
atgttaaaaaacaacaaagataataagaaggaagaagatgaagatgataataatataaaa
gatagtaaggaattagacactagagatgattaa
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