Plasmodium relictum: PRELSG_0921200
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Entry
PRELSG_0921200 CDS
T09405
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1, putative
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
prel
Plasmodium relictum
Pathway
prel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PRELSG_0921200 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prel03019
]
PRELSG_0921200 (LSM1)
Messenger RNA biogenesis [BR:
prel03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PRELSG_0921200 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
PRELSG_0921200 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hikeshi-like_N
Motif
Other DBs
NCBI-GeneID:
39736224
NCBI-ProteinID:
XP_028533117
UniProt:
A0A1J1H9K0
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Position
9:complement(754142..754824)
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AA seq
145 aa
AA seq
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MEQSMPLWLSSFEEEIDTYIFISSRDNKLYLGILRTYDQHGNIFLTHCVEKIIVAEKNYF
SDVYVGNLIIRGDNIAYFGSVDEEKYSKIFDYSQKNRNENDLDNEEINVPNQKEASNESV
TLQYKPVNHILKFITENNNDSIFEN
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atggagcaatcaatgccgttgtggttaagtagttttgaagaagaaattgatacatacatt
tttatctcatcacgagataacaaattatatttaggtatcttaagaacatatgatcagcat
ggcaacatattcttaactcattgtgttgaaaaaattatagttgcagaaaaaaattatttt
tctgatgtatatgttggaaacttaataattagaggagacaatattgcatactttggttca
gtagatgaagaaaaatactctaagatatttgactattctcaaaaaaacagaaatgaaaat
gatttagataatgaagaaataaatgtaccaaatcaaaaagaagcttcaaatgaaagtgtg
actcttcagtataaaccagttaatcatattttgaaatttataacagaaaataataatgat
tctatttttgaaaattaa
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