Plasmodium relictum: PRELSG_0925800
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Entry
PRELSG_0925800 CDS
T09405
Symbol
NOT2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2, putative
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
prel
Plasmodium relictum
Pathway
prel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PRELSG_0925800 (NOT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prel03019
]
PRELSG_0925800 (NOT2)
Messenger RNA biogenesis [BR:
prel03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PRELSG_0925800 (NOT2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PRELSG_0925800 (NOT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
39736270
NCBI-ProteinID:
XP_028533163
UniProt:
A0A1J1H5H3
LinkDB
All DBs
Position
9:complement(899704..902346)
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AA seq
880 aa
AA seq
DB search
MGRGNKEKKREKSKNSLKLTNRKKKKNLVGNSKSEDNDIDNINSETNEQFSDILNENNSK
RNNIENDELNYENKVENCLNNNSIFDMNYDKVECLESLNENLGKNNAIASDLQDNISNEL
QDKKSYKEKKKSEKNKIKKEEINTKEDKIREFKVKDSSNSESSNEGDKDNNISCKSKKCL
TEDKDKEDNMENKDKENNNKENKNRDNIIIKGCDSNSISYSDNNECNNNTSKGILNYDNS
SNINNKENLETGKIIDNDDSKNGKIESKKNIKFDNNKSNNNNKAKNDTKDEEVILNNETN
TDNSKNKKNKKYIKTNDTITKAKLNLINTNNNDLNYTNEKKCSENNKCTIVKTLNHDKMN
NDNNNINNDNNNHNNSNSNNNNNSSNNNNNNGNDNRNNNNNNNNNNNNNNNNNNNNNNNN
NNNNSNSNNNNSNDNSNNNNNSNGNNNNSNNNDDDDNNKTNNKLEVIVESKKNKDKENNL
INSVKHIKEANNILQENITKNSDILKIDEKINDVNNKIFKKREANKKKNIDKELNKEGMH
KKKAKEKETNKEEFCNKKNTKEEINKRKNEKEEIIKKKMDEKEINNERINNEETVHKEVE
NGELPILKEQINKEIINKKEVNSKKEECDKEEVNEKDKINNNKEVDDRKNEENLTLEEIL
YETTERSKRYNRNNYGLLGILKVIKMTDPHLNILALGTDLTTLGLNLNSPDFLFSSFSSP
LSDDPTNKDDYFTKPSSYLNTQFQIRLSLLLKLQTETLFYIFYNLPRDVLQAYAASELYI
RKWLYHIIYKKWFTPNNSSNYTNLEKCSSWVYFDPITWTKKTYDDFLNIEDIMNVEDVTK
CIEHIIKLQSYYNINQSNNSKNVESNANNNKISNNISSTL
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgggtagggggaataaagaaaaaaagagagaaaaaagtaaaaattccttaaaattgaca
aacagaaaaaaaaaaaaaaacttagtgggaaacagcaaaagtgaagataacgatattgat
aatataaacagtgaaactaatgaacaattctcagatatattaaatgaaaataatagtaaa
agaaataatattgaaaatgatgaattaaattatgaaaataaagtagaaaactgtttaaat
aataattccattttcgacatgaattatgataaagtggaatgtttagaatcccttaatgaa
aatttaggaaagaataatgctatagcatcagacttgcaagataatatatcgaatgaatta
caggataagaaatcatataaagaaaagaagaaaagtgaaaaaaataaaattaaaaaagaa
gaaataaacacaaaagaagataaaattagagaattcaaagttaaagatagtagtaattcg
gaaagtagtaatgaaggtgacaaagataacaatataagttgtaaaagtaagaagtgccta
acagaagataaagataaagaagataatatggaaaataaggacaaagaaaataataataag
gaaaataaaaatagagataatattattataaaaggttgtgatagtaacagcatttcgtat
tctgataataatgaatgtaacaataatacaagtaaaggaattttaaattatgataattca
agtaatataaataacaaggaaaacttagaaactggaaaaattatagataatgatgatagt
aaaaatggtaaaatagaatcgaagaaaaatataaaatttgataataataaaagtaataat
aataataaagctaaaaatgatacaaaagatgaagaagtcattcttaataatgaaactaat
acagataactcaaaaaacaagaagaataaaaaatatataaaaacaaatgatactattact
aaagctaagttaaatttaataaacacaaataataatgatttaaattatacaaatgaaaaa
aaatgttcagaaaataataaatgtacaatagtaaaaaccttaaatcatgataagatgaat
aatgataataataatattaataatgataacaataaccataataatagtaatagtaataat
aacaataatagtagcaacaacaataataataatggtaatgataatagaaataataataat
aataataataataataataataataataataataataataataataataataataataat
aataataataatagcaatagtaataataataatagtaatgataatagcaataataataat
aatagcaatggtaataataataatagtaacaataatgatgatgatgataataacaaaaca
aataataaattagaggtcattgtagaaagtaagaaaaataaagataaagaaaataactta
ataaatagtgtaaaacatattaaagaagcaaacaatatactacaagaaaatattacaaaa
aattctgatattttgaaaatagatgaaaagataaatgacgtaaataataaaatttttaaa
aaaagagaagcaaataaaaaaaagaatatagataaagaattgaataaagaaggtatgcat
aagaagaaagcgaaagaaaaagaaactaataaagaagaattttgtaataaaaaaaataca
aaagaagaaataaataaaagaaaaaatgaaaaggaagagataattaaaaagaaaatggac
gaaaaagaaataaataatgaaagaattaacaatgaagaaacggttcataaagaggtagaa
aatggagaattacctatacttaaagaacagataaataaagagataattaataagaaagag
gtaaatagtaaaaaggaagaatgtgataaagaagaagtaaatgaaaaggataaaataaat
aataataaagaagtagatgatagaaaaaatgaagaaaatttaacactagaagaaatatta
tatgaaacaacagaaagatcaaaaagatataacagaaataattatggattattaggaata
ttaaaggttattaaaatgactgatcctcatttaaatatattagctttaggaacggattta
acaactttaggattaaatttgaattctcctgattttcttttttcatctttctcatctcct
ttatctgatgaccccactaataaagatgattatttcacaaaaccaagttcatatttaaat
actcaatttcaaattcgcctatcgttattattaaaattgcaaacagaaacattattttac
attttttataatttgccaagagatgtcctacaggcttacgcagcctcagaactttatata
agaaaatggttatatcatattatttataaaaaatggttcactccaaataattcttctaat
tatacaaatttagaaaaatgctcttcatgggtatattttgacccaattacatggacgaag
aaaacatatgatgattttttgaatatagaagatataatgaatgtagaagatgttactaaa
tgcattgaacatataattaaattacaatcttactataacattaatcaatcaaataatagc
aaaaatgttgaatcaaatgcaaacaataataaaataagtaataatatttctagcacttta
tag
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