Plasmodium relictum: PRELSG_1116900
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Entry
PRELSG_1116900 CDS
T09405
Symbol
TFB4
Name
(RefSeq) RNA polymerase II transcription factor B subunit 4, putative
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
prel
Plasmodium relictum
Pathway
prel03022
Basal transcription factors
prel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
prel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PRELSG_1116900 (TFB4)
09124 Replication and repair
03420 Nucleotide excision repair
PRELSG_1116900 (TFB4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prel03021
]
PRELSG_1116900 (TFB4)
03400 DNA repair and recombination proteins [BR:
prel03400
]
PRELSG_1116900 (TFB4)
Transcription machinery [BR:
prel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PRELSG_1116900 (TFB4)
DNA repair and recombination proteins [BR:
prel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PRELSG_1116900 (TFB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
PAV1-137_bromodom-like
Motif
Other DBs
NCBI-GeneID:
39736947
NCBI-ProteinID:
XP_028533825
LinkDB
All DBs
Position
11:complement(654030..654998)
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AA seq
322 aa
AA seq
DB search
MQKNEEVCSKTDNLKDEKEVKNHLILVIDVNLLIWCEGLKIKFDKNQVKTLKLSDFFKSI
FQFIRFYCFMSNSERICIIATCSNNCKIIYENYISYAKNNLTENDYCSDTYDNLINFINE
NKSDKLSESTLSSALIIALCYNNRICNLYENINTRIFLLDISKSHFYTNQYTQLMNIAYN
AKRNNVIIDVFSLNHKTKILEQICNITNGLYIDNSIFLNVNCNDKIEDILTQIIIFWFLP
SNNSRKYFSNTYLNEDTNIAVCSCHNKQIDIAYICSCCLAIYCSEKDSQTNKDRICCSIC
KTRFTKSLLRNKIVSDLDFTFI
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaaatgaggaagtttgctcaaaaacagataatttaaaagatgaaaaagaagtt
aaaaaccatttaattttagttatagatgttaacttattaatatggtgtgaaggattaaaa
ataaagtttgataaaaatcaagtaaaaactttaaaattatccgatttttttaaatcaatt
tttcaatttataagattctattgtttcatgagtaattcagaaaggatatgtataattgct
acatgttctaataattgtaaaatcatatatgaaaattatatatcttatgctaaaaataat
ttaacagaaaatgattattgtagtgatacttatgataatttaattaattttattaatgaa
aataaaagtgataaattaagtgaaagtaccttatcatcagccttaatcattgcattatgt
tataataatagaatttgtaatttatatgaaaatattaatactagaatatttttattagat
atatccaaaagccacttttataccaatcaatatacacaattaatgaacatagcttataat
gctaaaagaaataatgtaataattgatgtcttttcacttaatcataaaacgaaaatactt
gaacaaatatgtaatattaccaatggtttatatatagataatagcatatttttaaatgtt
aattgcaatgataaaattgaagatatattgacacaaattattattttttggtttttaccc
tcaaataattcgagaaaatacttttctaatacatacttaaatgaagataccaatatagct
gtttgctcctgtcacaacaagcaaatagatatagcttatatttgttcttgttgtttagct
atttactgctcggaaaaggattctcaaactaataaagatagaatttgttgttctatttgt
aaaacaagatttactaaatcattattaagaaataaaattgtttccgatctagattttact
tttatttaa
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