Plasmodium relictum: PRELSG_1137400
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Entry
PRELSG_1137400 CDS
T09405
Symbol
SPT5
Name
(RefSeq) transcription elongation factor SPT5, putative
KO
K15172
transcription elongation factor SPT5
Organism
prel
Plasmodium relictum
Pathway
prel03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
prel00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
PRELSG_1137400 (SPT5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prel03021
]
PRELSG_1137400 (SPT5)
03019 Messenger RNA biogenesis [BR:
prel03019
]
PRELSG_1137400 (SPT5)
Transcription machinery [BR:
prel03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
PRELSG_1137400 (SPT5)
RNA polymerase I system
PRELSG_1137400 (SPT5)
Messenger RNA biogenesis [BR:
prel03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
PRELSG_1137400 (SPT5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt5-NGN
KOW1_SPT5
KOW
KOW4_SPT5
KOW2_Spt5
KOW5_SPT5
KOWx_SPT5
SH3_KIN17_C
Thrombin_light
Motif
Other DBs
NCBI-GeneID:
39737153
NCBI-ProteinID:
XP_028534027
UniProt:
A0A1J1H7Z3
LinkDB
All DBs
Position
11:<1430856..>1434467
Genome browser
AA seq
1203 aa
AA seq
DB search
MEGNKILQNEIVNGDDEAKVINDEENEKEKEKLELKEVETEIGKEEEYKHIEQEEIKKQE
QMKEIYQTEDEEDEENENVKDILLKKKRKKGQFKSSYIDTEAQENEEDDEDIEYRENRKI
KKHGQKKRKLTTNKYISTFLDTEAQVGDDEEEEDYASSYIDEFEEAKKLEKKKMYETRLK
SGTNHLAQAINKLSQRYENEKEIKEDTLTDGETLTEEEMSGEEYFDEGECLSTFDSPKMW
LIKLFKNNIERNLAISIYYKYMKLKDNDFNIKGIYVSDNLKGYIYIEADSLYMLKRFLLG
FKYINLNEISIVPVQELTSIFAMCHSKVIIPKVNEYVRIKRGVYMNDIGQIFEVHEKGIY
AIVRLIPRISYDKYNNFKKDSYNNISSVNRVSSMLDENNKNDSFYLNDKLDINKNTNFSK
SQNENIINEKSDILDEALQFRRKKKKERPLKKFFDREEIEQIGGVIEHGPYPRTIKYQNN
IFEENGYLLKKMNIKYLISENANITLTEIRDFNKNNTNEEDINLHLSKAFINKNSLHLFK
KDERVKIMKGELYNLIGTITAINDNVLTVNPDNLAKEFKFLPSDVTKYFNEGDNVTVING
LHKGKSGLISLLDYKENVALIFSPSLNTELRSSIQDLTLSTNNSEGLGGVNTLNGFSIGD
LIELSDRQIGVLTYIDKNKHIRVLTNNNKILHTTIGAITSKRSAIGQVCKDENNNVIQAK
DTIQIIRGIHKNKVAVVNYIWKNKIFAKINRKIEDNGFVVVDCENCVLSGNRNEKKKIIT
HNNLFRNNNFFKKNNFQSFIGKTVKILTGVYKGLLGDVIDAERDEFTLLLKIKPKTVRQK
RIECAIADAYKDQNIFDEKSYGNEAIIGTKKGLEKIEKNQRSEKKIYDSYYNDNQKRSSD
RRKNDFSVRYEEKYFSYNKHKEKDFNYDNEKKKNYEINKSKNNKNYVEDWNYENDKHNVN
STMSNRKNESIYDKEDNDASYSKNYNNNYNKHSGNSKKFYKRNEEDRYKKNKNEENKKYN
KKKDHINEEYNLKYEEDKSYVCNFDEEIKKEVKKELKQEDEKKKVKNAQNSERKEEINKQ
HSIVDDNENNQKDPIWLIEGVMVKVITPGQFFNEIGRIMNITKKNSYIILKIQTEKTSFS
IVSDAVVPLKPEKKNDQVIIVDKGKTIEGLIIDIQNKEVQVNTIHGNITSHLQNMFLYKK
YFS
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaaataaaatattacaaaacgaaatagttaatggagatgatgaagcaaaagta
ataaatgatgaagaaaatgaaaaagaaaaagaaaaattagaattgaaagaagtagaaaca
gaaattgggaaggaagaagaatataagcatattgaacaagaagaaataaaaaaacaagaa
caaatgaaggaaatatatcaaacagaagatgaagaagatgaagaaaacgaaaatgtaaaa
gatattctgctcaaaaaaaaaaggaaaaaaggccagtttaaatcatcatatatagatact
gaagctcaagaaaatgaagaagatgatgaagatatagaatatagagaaaatagaaaaata
aagaaacatgggcaaaaaaaaagaaaattaacaacaaataaatatatatcaaccttccta
gatactgaagctcaagtaggggatgatgaagaagaagaggattatgcaagttcctatatt
gatgaatttgaggaagcaaaaaaattagaaaaaaaaaaaatgtatgaaactcgcttaaaa
agtggaacaaatcatttagctcaagcgataaataaattatcacaaagatatgaaaatgaa
aaggaaataaaagaggatacattaactgatggagaaacattaacagaagaagaaatgtca
ggtgaggaatattttgatgaaggagaatgtttaagtacttttgatagccccaaaatgtgg
ttaataaagctatttaagaataatatagaaagaaatttagcaattagtatttactataaa
tatatgaaactaaaagataatgactttaatattaagggaatatacgtttctgataattta
aaaggttatatatatatagaagcggatagtttatatatgttaaaaagatttttattagga
tttaaatatattaatttaaatgaaatatctattgtgcctgttcaagaattaacttcaata
tttgctatgtgccattctaaggttattatacctaaggtaaatgaatatgtaagaataaaa
agaggagtttatatgaatgatataggtcaaatatttgaagtacatgaaaaaggaatatat
gcaatagttcgattaataccaaggatatcctatgataaatataataattttaaaaaggat
agttacaataatatatcttctgtaaatagagtgagttctatgttagatgaaaataataaa
aatgattctttttatttgaatgacaaattagatataaacaaaaatacaaatttctccaaa
tctcaaaatgaaaatattataaatgagaagagtgatatattagatgaagctttacagttt
aggagaaaaaaaaaaaaggaaagacctcttaaaaagttttttgatcgagaagaaattgaa
caaataggaggtgttattgaacatggcccatatcctagaactatcaagtatcaaaataat
atatttgaagaaaatggatatttattaaagaaaatgaatataaaatatttaattagtgaa
aatgccaatataacattaacagaaataagggattttaataaaaataataccaacgaagaa
gatataaatttacaccttagtaaagctttcataaataaaaattctttacatttatttaaa
aaagatgaaagagtaaaaataatgaaaggggagctatataatttaataggaacaataaca
gctattaatgataatgtactaacagtaaatccagataatttagcaaaagagtttaagttt
ttaccaagtgatgttacaaaatattttaacgaaggagataatgtaacagtaataaatgga
ttacataagggaaaaagtggattgatatctttattagattataaagaaaatgtcgcactt
atattttccccttcattaaacacagaattgagatcatctatacaagatttaactttgtct
accaataacagtgaaggattaggtggtgttaatacactaaatggattttcaataggggac
ttaattgaattaagtgatagacaaataggagttttaacttatatagataaaaataagcat
attcgtgtattaacaaataataataaaatattacatactactataggtgcaataacatct
aaaagatcagctataggtcaagtttgtaaagatgagaataacaatgtgattcaagctaaa
gatactatacaaataattagggggattcataaaaataaagtagctgtagttaattatata
tggaaaaataaaatttttgcaaaaataaatagaaagattgaagacaatggttttgttgtt
gttgactgtgaaaattgtgttttgtcaggtaatagaaatgagaagaaaaaaataataaca
cataataatttatttagaaataataatttttttaaaaaaaataactttcaatcatttatt
ggaaaaactgttaaaatattaacgggagtttataagggactattgggggatgttattgac
gcagaaagagatgaatttactttacttttaaaaataaaacctaaaactgtaaggcaaaaa
agaatagaatgcgccattgctgatgcttataaggatcaaaacatatttgatgaaaaatct
tatggaaatgaagctataattggtactaaaaaaggtctagaaaagatagaaaaaaaccaa
aggtcggaaaaaaaaatatatgattcatattacaatgataaccaaaaaagaagttcggac
agaaggaaaaatgattttagtgtaagatatgaagaaaagtactttagttataacaaacac
aaagaaaaggattttaattatgataatgagaaaaaaaaaaattatgaaattaataaaagt
aaaaataataaaaattatgtagaagattggaattatgaaaatgataaacataatgtgaat
tcgactatgtctaatcgtaaaaatgaaagtatatatgataaggaagataatgatgcatca
tatagtaaaaattataataataactacaataaacatagtggtaattcgaagaaattttat
aaaagaaatgaagaagatcgttataaaaaaaataaaaatgaagaaaataaaaaatataat
aaaaaaaaggatcacataaatgaggaatataacttaaaatacgaagaagataaaagttat
gtttgtaattttgatgaggaaattaaaaaagaggttaaaaaggaattaaaacaagaagat
gaaaaaaaaaaggtaaaaaatgcacaaaatagcgaaagaaaagaagagattaacaaacaa
catagtatagtagatgataatgaaaataatcaaaaagatcctatatggttaattgaagga
gtaatggtaaaagtaattacaccagggcaattttttaatgaaataggaagaattatgaat
ataacaaaaaagaattcttatattattttaaaaatacaaacagaaaaaacatcctttagt
atagtttctgatgcagttgttcctttaaaaccagagaaaaaaaatgatcaagttataatt
gtagataaaggaaaaacaatagaaggattaataatagatattcaaaataaggaagttcag
gttaatacaatacatggaaatataacatctcatttacaaaatatgtttttatataagaaa
tatttttcataa
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integrated database retrieval system
