Plasmodium relictum: PRELSG_1215500
Help
Entry
PRELSG_1215500 CDS
T09405
Name
(RefSeq) tRNA 3'-trailer sequence RNase, putative
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
prel
Plasmodium relictum
Brite
KEGG Orthology (KO) [BR:
prel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prel03016
]
PRELSG_1215500
Enzymes [BR:
prel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PRELSG_1215500
Transfer RNA biogenesis [BR:
prel03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PRELSG_1215500
Prokaryotic type
PRELSG_1215500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B_4
Lactamase_B_6
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
39737399
NCBI-ProteinID:
XP_028534272
UniProt:
A0A1J1H9S8
LinkDB
All DBs
Position
12:complement(606681..610356)
Genome browser
AA seq
822 aa
AA seq
DB search
MEVYIQIIGWHRLAIPSSLRLFVNGDVTLFNCGENNQRFLNEHKLHLVKIKNIFFTKINP
ETIGGLIGLLLTIDNISDNCISIYGPKPIERIINNFTSTFAKMKNIKIKVYEISNNISPI
ILKGNVVITPIILDENKILLKENMNIINDDISYINTNKKKIIKKDSMSYEKKNFYHKYGD
KPKEEDPEDTYLNNLKKRKMDKNYGDRNGNESVTEYENKFEEKNQNNNLSEDENKKKNNN
IAFNSICYLIECPQTLGKFHPEKAKSLNIPSGKYYGILKSGKSITINNKIIKTEDVCDKN
IDGRKSLIIDLLNSEDINCLIKEITNKENFYLKNLEYVFHLSCDEITNCKKYRDFFLSLK
NVKNIKCNQSNSSLSVCPFVSSSSLNNFLSKLLPNIFLKYKPDTPIYNMSYLLQNDKEKK
DPIMIRNSFVNEKNETENVIQKNTNLNNINDLSAEAENEIINEKNEKNNSYLLYNPLTKF
ILHPFHKINICTSEMLSDLYPNIFNYSKISKVLKENEDLIKTFENFNQTKFSNFSEVPSF
YFLGTGCSMPSTFRNVSGILLNIQKNFSIVLDFGEGSLYQLYWMSKSWIHFSEIIKSIKV
IFISHSHADHHAGLYYLLYIRKIFFPNLDHPILLIPITLKSWMNLLNELFFDKPVKVIYN
SENLEIKEKIEEDFLNMQLFKVNHINESYGVKIENKNIGSVVYSADTRPCSNIKKFSKGC
NILIHEATFDDELLNEAIQKKHSTTQEAMQISLEVKCKILILTHFSQRYPKVPKLNKQSS
TEFNEIISKTIYSFDYMCIPLNLINELPHYFNILLNLLEKIF
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgtatattcaaataataggttggcatagattagcaataccatctagtttacgc
ttatttgtgaatggggatgttactctttttaattgcggtgaaaataatcaacgattttta
aatgaacataaattacacctagttaaaataaaaaatatattttttacaaaaattaatcct
gaaactattggtggtttgattggactattattaacaatagataatatatcagataattgt
attagtatatatgggcccaaaccgatagaaagaattattaacaattttacctctactttc
gcgaaaatgaaaaatataaaaattaaggtatatgaaatttctaataatatatcaccaata
attttaaaaggaaacgtcgtgataactcccataatactcgatgaaaataaaattcttcta
aaggaaaatatgaatataataaatgatgatataagctatataaacacaaataaaaagaaa
attattaaaaaagatagtatgagttatgagaaaaaaaacttttaccataaatatggggat
aagccaaaagaagaagatcctgaagatacatatttaaataaccttaaaaaaagaaagatg
gataaaaattatggagatagaaatggaaatgaaagtgtgacagaatatgaaaataaattt
gaagaaaagaatcaaaataataatttaagtgaagatgaaaataaaaaaaaaaacaataat
atagcatttaatagcatttgttatttaattgaatgcccacaaacattggggaaatttcat
ccagagaaagctaaaagtttaaatattccatcgggaaaatattatggcatattaaaatca
ggaaaatctattacaataaataataaaataataaaaactgaagatgtttgtgataaaaat
atagatggaagaaaatcattaattattgatttattaaacagtgaagatataaattgttta
attaaagaaataacaaataaagaaaatttttatttaaaaaatttagaatacgtttttcat
ttatcctgtgacgaaattaccaattgtaaaaaatacagagatttttttttaagtttaaaa
aacgtaaaaaatattaaatgcaatcaatccaatagttcattaagtgtatgcccttttgtt
tcctcttcttcattaaacaactttctttctaaattattaccaaacatttttttaaagtat
aaacctgatacacctatatataatatgtcatatttattgcaaaatgacaaagaaaaaaaa
gatccaattatgataagaaattcttttgtaaatgaaaaaaatgagacagaaaatgttata
caaaaaaatactaatttaaataatataaacgatttatcagcagaagcagaaaatgaaata
ataaatgaaaaaaatgaaaaaaataattcttatcttttatataacccattaacaaaattt
attctacatccttttcataagattaatatatgcactagtgaaatgttatctgatttatat
ccaaacattttcaattactcaaaaatatcaaaagtgttaaaagaaaatgaagacttaata
aaaacctttgaaaattttaatcaaacaaaattttctaatttttcagaagtaccttctttt
tattttcttggtactggatgttctatgccttcgacttttcgtaacgtatctggtatactt
ttaaatattcaaaaaaattttagtattgttttggacttcggggaaggttctttgtaccag
ttatattggatgagtaaatcgtggatacatttttctgaaattattaaatcaatcaaagta
atatttatatcacattcccatgcagatcatcatgcgggtctttattatttattatatata
agaaagatattttttcctaatttagatcatccaatattgttaattccaataactttaaaa
agttggatgaatttattaaatgagttattttttgataaaccggtaaaagttatatataat
tcagaaaatttagaaataaaagaaaaaatcgaagaagattttttaaatatgcagcttttt
aaggttaatcatattaatgaatcatatggtgtcaaaattgaaaacaaaaatattggttcc
gttgtatattcagccgatacacgaccttgtagtaatatcaaaaaattttcaaaaggatgc
aatattttaatccatgaagctacatttgatgatgaattattaaacgaagctattcaaaaa
aaacattctactacacaagaagcaatgcaaataagtttagaagttaaatgtaaaatatta
atattaacacattttagccaaagatacccaaaggtccccaaattaaataagcaatcatcc
actgaatttaatgaaattattagtaaaacaatatatagcttcgattatatgtgtattcct
ttaaatttaataaatgaattacctcattatttcaatattttattaaatttattagaaaaa
atattttaa
DBGET
integrated database retrieval system
