Plasmodium relictum: PRELSG_1254000
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Entry
PRELSG_1254000 CDS
T09405
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4, putative
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
prel
Plasmodium relictum
Pathway
prel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PRELSG_1254000 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prel03041
]
PRELSG_1254000 (PRPF4)
Spliceosome [BR:
prel03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
PRELSG_1254000 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WD40_RFWD3
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
PRP4
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_SCAP
NBCH_WD40
RMC1_N
WD_LRWD1
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
39737784
NCBI-ProteinID:
XP_028534652
UniProt:
A0A1J1H9N3
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Position
12:complement(2094163..2095983)
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AA seq
606 aa
AA seq
DB search
MKINDIFNESKMQENLKLKKNDLNSYEINNEHILEEFEIKSKIRKVCLGIPTKDLDVKNI
LRLLKEPICLFGEDSYDKRKRLKNILITKYDKLIIKKKSENEEEVEEFQNILKKYYIDFS
NLYDLSSSDILKVNDFEEELGKKTLNKHTAKSKEEENSLKEKFYTESTEELKLARIDIML
QTLPRIFLYKEMIYKFQKKYSREDFDNYIISYNENMKNYLDLHISQLGDDRPLTMGKFSP
DNSVFAVSSYNTYINLFNYKNDNYNVIKTLKKGHDDKINCIEWNFPNNYSYYSTLNYNDI
SKKDLLLASCSSDKTFCIWRPFLSDEEITISNKKNNQAKKRNHNDINEINDEKINKENYY
ENYKEQNGEEVSYEDENKNGQSDKNLLCKVKAHEDRINKICFHPLNKYVLTCSEDETIKF
FDIETNKELFYQEGHNSNVYTAAFNTYGNLYLSGDSRGGLMLWDIRTGRNIEKKIVHNKC
IMNINFNPFMPNMFCTCSSDNTIKVFDLRNFQTSCNILAHNKIVTDVIFEPMYGRYITSS
SFDTFIKIWDSVNFYCTKVLYNNDNKVRNVDISPDGNFISSTSFDRTWKLYKNREFSEDN
ILSDFF
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaatgatatttttaatgaatcgaaaatgcaggaaaatttaaaactaaaaaaa
aatgatctaaatagttatgaaattaataacgaacatatattagaagaatttgagataaaa
agtaaaataagaaaagtttgcttaggtataccaacaaaagatttagatgtgaaaaatatt
ttaagattgttaaaagaaccaatttgtttatttggtgaagatagttatgataaaagaaaa
agattaaaaaatatattaattactaaatatgataaattaataattaaaaaaaaaagtgaa
aatgaagaagaagtagaagaatttcaaaatattttaaagaaatattatattgactttagt
aatttgtatgatttaagttcttcagatattttaaaagtcaatgattttgaagaagaatta
gggaaaaaaactttaaataaacatactgcaaaaagtaaggaagaagaaaatagtttaaaa
gaaaagttttatactgaaagtacagaagaattgaaattagcaagaatagatataatgcta
caaactttgcctagaatatttttatataaagaaatgatatataaatttcagaaaaagtat
tctagagaagattttgataattatataatttcttataatgaaaatatgaaaaattattta
gatttacatatctcacaattgggggatgacagacccttaaccatgggaaaattttctcca
gataatagtgtttttgctgttagtagttataatacatatataaatttatttaactataaa
aatgataattataatgtaataaaaactcttaaaaaaggtcatgatgataagataaattgt
atagaatggaactttccaaataattattcatattatagtactttaaattataatgatata
tcaaagaaagatttactgttagcttcttgctcatcagataaaactttttgtatatggaga
ccatttttaagtgatgaagaaattactatttcaaataaaaaaaataatcaagctaagaaa
agaaatcacaatgatattaatgaaataaatgatgagaaaataaacaaagaaaattattat
gaaaattataaagaacaaaatggggaagaagtaagttatgaagatgaaaacaaaaatggc
cagagtgataaaaatttgttatgtaaagtaaaagcacatgaagatagaataaataagata
tgttttcatcctctaaataaatatgtcttaacatgttcagaagacgaaacaataaaattt
tttgatattgaaacaaataaggagttattttatcaagaaggtcacaacagtaatgtttac
acagctgcttttaatacatatggaaacttatatttatcaggagactcaagaggtggctta
atgctatgggatattagaacaggaagaaatatagaaaaaaaaattgttcataataaatgt
ataatgaatataaattttaatccgtttatgccaaatatgttttgcacttgttcatctgat
aacactattaaagtttttgatttaaggaattttcaaacatcttgcaatatattagctcac
aataaaattgttactgatgtaatttttgaacctatgtatgggagatatattacttctagt
tcttttgatacttttattaaaatatgggattctgtaaacttttattgcaccaaagtttta
tataataatgacaacaaagttagaaatgttgatatatctccagatggcaattttatttct
tctacatcttttgatagaacatggaaattatacaaaaacagagaattttctgaagataat
attttatcagattttttttga
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