Plasmodium relictum: PRELSG_1344800
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Entry
PRELSG_1344800 CDS
T09405
Name
(RefSeq) RNA-binding protein, putative
KO
K12876
RNA-binding protein 8A
Organism
prel
Plasmodium relictum
Pathway
prel03013
Nucleocytoplasmic transport
prel03015
mRNA surveillance pathway
prel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PRELSG_1344800
09122 Translation
03013 Nucleocytoplasmic transport
PRELSG_1344800
03015 mRNA surveillance pathway
PRELSG_1344800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prel03019
]
PRELSG_1344800
03041 Spliceosome [BR:
prel03041
]
PRELSG_1344800
Messenger RNA biogenesis [BR:
prel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PRELSG_1344800
Spliceosome [BR:
prel03041
]
Complex C
Other components
EJC/TREX
PRELSG_1344800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
DUF5892
Motif
Other DBs
NCBI-GeneID:
39738382
NCBI-ProteinID:
XP_028536080
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All DBs
Position
13:complement(1761721..1762430)
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AA seq
106 aa
AA seq
DB search
MEDNLSNVFKKDEIPAKSIEGWIIIITNIHGEARDDYIKEVFEKFGQVKNLHLNLDRRTG
FLKGYAFLEYENFVDAKRAIDEMDGSILLNQEIHVDWAFVQEKSKN
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atggaagataatttaagtaatgtttttaaaaaagatgaaattcctgcaaaatctattgaa
ggatggataatcataataacaaatattcatggtgaagcaagagatgattatataaaagaa
gtttttgaaaaatttgggcaagtaaaaaatttacatttaaatttagatagacgaacaggt
tttttaaaaggatatgcatttcttgaatatgaaaattttgttgatgctaaaagagcaatt
gatgaaatggacggatcaattttgttaaatcaggaaattcatgtagattgggcatttgta
caagaaaaaagtaaaaattaa
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