Plasmodium relictum: PRELSG_1414900
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Entry
PRELSG_1414900 CDS
T09405
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2, putative
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
prel
Plasmodium relictum
Pathway
prel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PRELSG_1414900 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prel03041
]
PRELSG_1414900 (USP39)
Spliceosome [BR:
prel03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
PRELSG_1414900 (USP39)
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
39738580
NCBI-ProteinID:
XP_028534940
UniProt:
A0A1J1HAG8
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Position
14:<549862..>551724
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AA seq
620 aa
AA seq
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MEKKIKKEFKNEKDELTFKKRKKEENTNNLEDYVNNEMNNLNVGINDDMNEVNHLKNNLN
KTDNDLNDEIKNMNLNRNKSKVCPYLRTINRNLLDFDFEKLCSISLSNLHVYACLVCGLY
FQGIGKGTYAYTHALEKNHYVFINLETCKTCCLPENYEIEDASLNDIKYFLKPLYTREEV
EYLCFNPILGKSLDGADFLPGCVGLNNLKNTDYCNVIIQLLCTIIPLRNILLLYENKKNI
AKNLIIVLSELIKKIYNPKNFKGVVSPHEFLQAVGIESKKNFKIGTKNDPLDFFLWIINK
IHKYSEKTLKKKRKGNNYKNLKLKEISKDKMLEENNNFKKEENSFTQKESNNNKNSVDKK
KKKWVYEKINIIDYCFDGELIIKTKREKSEMDKVEKDGENEEKEVAEEEIRKEKKKNENI
LEEEIDEDELNEKKNYKIKKIPFRTLSLKLPNPPIFKSTTESNIIPQVSIFELLTKFDGE
TETFLLDKSVPSTLMISKLPKYLIFTIKRFSKNNFFVEKNGTIVNFVIKNLDMKDYVHQD
FLTQNPVTKYNLIANIFHSGTVNQGSYKIHVLNQSTNEWYEIEDLHVISILPQLVLLSES
CIQLYQRQDIQLDGEINPSF
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaaataaagaaagaatttaaaaatgaaaaggatgaattaactttcaaaaaa
agaaaaaaagaagaaaatacaaataatctagaagattatgtaaataatgagatgaataat
ttaaatgttggcataaatgatgatatgaatgaggtgaaccatttgaaaaataatttgaac
aaaacagataatgatttaaatgatgagataaaaaacatgaatttaaatagaaataaaagt
aaagtttgcccatatttacgtacaattaatagaaatcttctagacttcgattttgaaaaa
ttatgtagcattagtttgtcaaatttacatgtatatgcttgtttagtatgcggtttatat
tttcaaggaattggaaaaggaacatatgcatatactcatgctttagaaaaaaatcattat
gtttttattaacttagaaacatgtaaaacttgttgtttaccagaaaattatgaaattgaa
gatgcctcattaaatgatataaaatattttttaaaacctctttacacaagggaagaagtt
gaatacctgtgttttaatcctattttaggaaaatcattagatggtgctgattttttgcca
ggttgtgttggtttaaacaatttaaaaaatactgattattgtaacgtaataattcaatta
ttatgtactattatacccttaagaaatattttattattatatgaaaataaaaaaaatata
gcgaaaaatttaataatagtactttctgaattaattaaaaaaatttacaatcctaaaaat
tttaaaggagttgtatctcctcatgaatttttacaagcagtaggtatagaatctaaaaag
aattttaaaataggaacgaaaaatgatcctctagatttttttttatggataattaataaa
attcataaatattcggagaaaactctgaaaaaaaaaagaaaaggaaataattataaaaat
ttgaaattaaaagaaatttctaaagataaaatgttggaagaaaataataattttaagaag
gaagaaaacagttttacacagaaagaaagtaataacaataaaaacagtgtagacaaaaaa
aaaaaaaagtgggtatatgagaaaataaacatcattgattattgttttgatggagaatta
attattaaaactaaaagagaaaagtcagagatggataaagtagaaaaagatggtgaaaat
gaagaaaaagaagtagctgaagaagaaatacgtaaagaaaaaaaaaaaaatgaaaacatc
ctagaagaggaaattgatgaagatgaattaaacgaaaaaaaaaactataaaattaaaaaa
attccatttcgtactctttccttaaaattaccaaatccaccaatctttaaaagtacaaca
gaaagtaatataatacctcaagtttctatttttgagttgctaacaaagtttgatggagaa
acagaaacctttttgcttgataagtctgttcctagtacattaatgatttctaaattacca
aaatatttaatttttactattaaaaggttttcaaaaaataatttttttgttgaaaaaaat
ggaacaatagtaaattttgtaattaagaatttagatatgaaagattatgttcatcaagat
tttcttactcaaaatcctgtaaccaaatataatttaattgcaaatatatttcatagtggt
acagtaaatcaaggttcttataaaattcatgttttaaatcaatcaacaaatgaatggtat
gaaatagaagatttacacgttatttcaatattaccacaattagttttactatcggaatct
tgcatccaactatatcagcgacaagatatacagttagatggagaaataaatccaagtttt
taa
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