Plasmodium relictum: PRELSG_1458900
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Entry
PRELSG_1458900 CDS
T09405
Name
(RefSeq) microtubule associated katanin, putative
KO
K14962
COMPASS component SWD2
Organism
prel
Plasmodium relictum
Pathway
prel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
prel00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PRELSG_1458900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prel03019
]
PRELSG_1458900
03036 Chromosome and associated proteins [BR:
prel03036
]
PRELSG_1458900
Messenger RNA biogenesis [BR:
prel03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
PRELSG_1458900
Chromosome and associated proteins [BR:
prel03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
PRELSG_1458900
COMPASS/SET1 complex (yeast)
PRELSG_1458900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
PD40
NusG_add
Motif
Other DBs
NCBI-GeneID:
39739021
NCBI-ProteinID:
XP_028535375
UniProt:
A0A1J1HC26
LinkDB
All DBs
Position
14:complement(2260032..2261710)
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AA seq
373 aa
AA seq
DB search
MLNSILYKKIKLTDDIVKKFEVIRAFKYKHTLTKNLAWSYDGELLLTSNGNDSLTVYSLV
KGNSLKTLHSKNCGVDVIRFLNNSNDMIVCSTKSNNLEHKQFLRFWDIKENKYLKSLPQI
GNICELNGICVNQNKKLMLVNSDDGHIKLYYMNCDSPLILYKSNFMRPVSSFDNEGVIFA
ASFGKQEIHFYDLLMYDSGEYNIFNLKNNMNKEEFITNLLFTPNNKSIIVSTNENKHFRI
DSITGCYICSYNYPTYSENNNFYDISSNLIEEKKNSSNSIINFCDQLNDSDNNNLSCHFE
NSKNDFFLPTITPDGKYIMCGWKDSGIHIWNENGNYITSLYGHEGPPKNVSFNPKCSILA
SSCLNIALWQPSM
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgctgaattctatattatataaaaaaattaaattaactgatgatatagtaaaaaaattt
gaagtaataagagcatttaaatataaacatactttaacaaaaaatttagcatggagttat
gatggagaattattattaacatcaaatggaaatgattctttaacagtgtatagtttagta
aaaggaaatagtttaaaaacattacatagtaaaaactgcggagttgatgttataagattt
ttaaataatagtaatgatatgattgtttgttcaacgaaatctaataatttagaacataaa
caatttttgagattttgggatataaaagaaaataaatacttaaaatcattaccacaaatt
gggaatatatgtgaattaaatggtatttgtgtaaatcaaaataaaaaactaatgttagtt
aattctgacgatggccatataaaattatattatatgaattgtgattctcctttaatccta
tataaatccaattttatgagacctgtttcttcttttgataatgaaggagttatatttgct
gcttcatttggtaaacaagaaattcatttttatgatttgttaatgtatgacagtggtgag
tacaatatttttaatttaaaaaataatatgaataaagaagaattcatcacaaatctcttg
tttacaccaaataataaatcgataatagtttctactaatgaaaataagcattttagaatt
gattctattacgggatgttatatatgttcttataattatcctacttattcggaaaataat
aatttttatgatataagtagtaacttgatcgaagaaaaaaaaaattcctcaaattctatt
attaatttttgcgatcaattaaatgattcagacaataacaatttaagttgtcattttgaa
aattcaaaaaatgatttttttcttccaactatcacacctgatgggaagtacattatgtgt
ggttggaaagattcaggtattcacatttggaatgaaaatggaaattatataacatcttta
tacggacatgaaggtcctcccaaaaatgtgagctttaatccgaagtgctctatactggct
tcaagctgcttaaatatagctttgtggcaaccatctatgtaa
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