Poecilia reticulata (guppy): 103456616
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Entry
103456616 CDS
T05149
Name
(RefSeq) spermatogenesis-associated protein 13-like isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
103456616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pret04131
]
103456616
Membrane trafficking [BR:
pret04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
103456616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
PRRSV_Env
Motif
Other DBs
NCBI-GeneID:
103456616
NCBI-ProteinID:
XP_008394495
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All DBs
Position
LG20:complement(14794097..14818762)
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AA seq
1267 aa
AA seq
DB search
MSRAEQKDKVLSRSEDPLQCLHRPNPNPLIRSRPLSDVYPSQVVVDRSSVPYLLSGCGAQ
VQPVGAAPISDESRINGISPSAWSNPVIGQAEVRPHNSRIMRLFSNSRKGVIPPSSPTAD
CPNNDSNGGPQPWTGLSGLGVVDSFKKLRSSVLQGIQSKGAATSSLGQNVPLADVEMPNG
SAGSSSEREPADAAHLLTTAEGNLVSNGSLADQKSATIEQYGSDIEDYDDEEAESGITRN
SRFSRSMRKAYGAGRITLLDTKNGRSDKNDTTSSTQIPNPSLKVDVQTETQKENINVNVL
SRFSKSADNLHIFRRKNHCPGPPSPQEDPQRITLSNGTPSIQRTASTSSVDLRGRRSPTK
NKGPMVKLIGSMTDLTGRRKQSPSPSPTSPSPISPLSRLHDDYSRRLPCLQSSERQRRPV
AVTAQVSSVRCTPLIHAQPEDSADLQSHQGVADPLSSGPRESPEQISADISAQHELLPAS
TTSNAKQMVECVSPPLSEREALQQQPDFASIPNEVKSHLQEQESILQTDKVSPAGSSPPL
DPPACLSSTPVSPTPPTDGAAASTESASVKPRQRSGRPRPRPISDYAQLVSRKHCIPEEV
AETNYEERTQDAQLQEDCRSSGNVSNPDNCSLNGEVQRHRPVSVIGAVDLFAADTELKED
RLPSPLSRPPIPSHKVPPYRGVSARFRPCALSQSTPIGLDRVGRRRLHRVLSAGVSECSA
TLDDSVSEEEEEESSFEELADGTPYLQPGVELSVLNEWIISGHAVYAEALWDHVTMEEQE
LAFKAGDVIRLLDASHKDWWWGRGGDREAWFPSSFVRVRVNQEDSSTESVESVADQEEPA
PRDKPSTQHREQMRTNVVQEIMNTERIYIKHLKDICEGYIRQCRKNSSMFTELQLKTIFS
NIEDIYRFQRQFVRELEKKYNKEEPHLSEIGSCFLMQGEGFSIYSEYCNTHPAACAELQR
LMKMGKYKHFFEACRLLQQMIDISIAGFLLTPVQKICKYPLQLGELLKYTPKDHRDHAGV
SEAYEAMKKVASLINERKRRLESIDTIAQWQVAILHWEGPDVLERSSELIHSGELTRAVR
QGKPQQRSFFLFDHQLVYCKKDVLRRDLLHYRGRLDMDEIEVVDVADGRDPDLGLTLKNA
LRLRNASTLEFMCMMCCRKVEDKQRWLEAFAKERQRVKEDQEMGIDISDEQRKQAIANAR
RPKHGKIKTVGYADSVPPHQNLPPLQQRHITIPTSVPQQQVFSLAEPPRRKPYHLLYSIT
RSALFRK
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgagcagggcagaacagaaggacaaggtcttgtcccgaagtgaagaccctctccagtgt
ctgcaccgcccaaaccccaaccccctgatccggagcagacctctgagtgacgtttatcca
tcgcaggtcgtcgttgacaggagctctgtcccctacctgctgtctgggtgtggtgcccag
gtacagccggtgggtgctgctccgatctctgacgagagcaggataaacggcatcagcccc
tctgcctggtccaaccctgtgataggtcaagcagaagtaaggcctcataactcaagaatt
atgaggctgttttcaaactccaggaagggcgtcatccctcctagtagtcctactgccgac
tgtccaaacaatgacagcaacggcggcccccagccgtggaccgggctttcagggctgggt
gtggtggactccttcaagaagctacgatcgtctgtactgcaaggaattcagagtaaaggg
gcagcaacaagcagccttggacagaatgtaccattagcggatgtggaaatgccaaatgga
tcagctgggagcagctcagaacgtgagccagctgacgctgctcatcttttaacgactgca
gaaggaaatcttgtatcaaatggaagtttagctgaccaaaaatctgcaacgattgagcag
tacggctcagatattgaggactatgatgatgaggaagctgaaagtggtatcacacgcaat
tcccggttttccagaagcatgaggaaagcatacggggcaggaagaatcacgttacttgat
acaaaaaatggaagaagtgacaaaaatgacactacaagcagcacgcaaataccaaatcct
tcattaaaggtggacgtccagacagaaacccagaaggaaaacattaatgtgaatgttctg
agcagattcagtaaaagtgcagataacctgcatatatttagacgtaaaaaccattgtcca
ggtcctccatccccacaggaagaccctcagaggatcacattgtcaaatgggaccccaagc
attcaaagaactgccagcacttcctcagtggacctccgaggcaggaggagcccgacgaag
aacaaggggccaatggtcaagctaatcggcagcatgactgacctaaccggccgacgaaag
caaagtccgtccccaagtcccacgtctccatctcccatctcccctttgagccgtctccac
gatgactactctcgccgtttgccttgcctgcagagcagcgagcgacagcgccggcccgta
gccgtcaccgctcaggtcagctctgtcagatgtactcccctcattcacgcccagcctgaa
gacagcgcagacctgcagtcgcatcagggtgtcgccgacccactttcctcagggcccaga
gaatcaccagagcagatttcagctgatatctctgctcagcatgagctgctgcctgcttca
actaccagtaatgctaaacagatggtcgaatgtgtttcacccccactcagcgagagagag
gcattgcaacaacaacctgactttgcctcgataccaaatgaggtgaaatcccaccttcaa
gaacaagagtcaattctccaaacagacaaagtctccccagcgggcagcagcccacctctt
gaccccccagcatgcctctccagcacacccgtatcccccacacctcccacagacggagct
gcagcttccacagaatccgcctctgtcaagcccagacagaggagcgggcggcccagacct
cggccgatctccgactacgcccagctcgtttccaggaagcactgcatccccgaggaagta
gcagagacaaactacgaggaaaggacacaagatgcgcagctgcaggaagattgcaggtcc
agtgggaacgtcagcaaccctgacaactgtagccttaacggggaggttcagagacatcgg
cccgtctcggtgatcggggccgtggatctgttcgctgcagatactgagctaaaggaggat
cgccttccttctcctttgtcgcgaccaccaatcccctcccacaaggtgcccccctacaga
ggagtgtctgccagattccgaccctgcgctctctcccagagcaccccgatcggactggac
cgcgtggggcggcgcagactccaccgagtgctcagcgctggtgtgtctgagtgttcggcg
acgctggatgacagcgtgagcgaggaggaggaggaggagagcagcttcgaagagctcgct
gatggaacaccctacctccagcctggggtggagctctccgtgctcaacgagtggataatc
tcgggccatgccgtgtacgccgaggctctctgggaccatgtgaccatggaggagcaggag
ctggccttcaaggccggcgatgtgatccgcctcctggacgcctctcacaaggactggtgg
tggggcagaggaggcgacagggaggcctggttcccgtccagctttgtgagggtccgtgtg
aaccaggaggactcgagcactgagagcgtggagagcgtggcggaccaggaagagccggcc
cccagggataaacccagcactcagcacagggagcagatgagaaccaacgtggttcaggaa
atcatgaacactgaacgcatctacatcaaacacttaaaagacatctgtgagggttacatc
cgtcagtgccggaaaaactccagcatgttcacagagctgcagctgaagacgattttcagc
aacatagaagacatctacagattccagaggcagttcgtcagggaactggagaagaagtac
aataaggaagaaccgcatctcagtgaaatcggctcctgcttcctcatgcagggcgagggc
ttttcgatctactccgagtactgcaacactcatcctgctgcctgcgctgagctgcagcgt
ctcatgaagatgggcaaatataagcatttctttgaggcctgccgcctcctccagcagatg
atcgacatctccatcgctggtttcttgctcacacctgtccagaagatctgcaaatacccg
ctgcagctgggggagctgctcaagtacacacccaaagaccacagggaccacgccggtgtc
agcgaagcgtacgaggctatgaagaaggtggccagtttaatcaacgagaggaagcggcgg
ctggagagcatcgacaccatcgctcagtggcaggtcgccattctgcactgggagggccct
gacgtgctggagcgcagctcggagctgatccactccggcgagctgacccgcgccgtccgg
cagggtaaaccgcagcagcgcagcttcttcctgttcgaccaccagcttgtctactgcaaa
aaggacgtcctgcgcagagacctgctgcactaccgaggacgtctggatatggacgagatc
gaagtggtggacgtcgccgacgggcgggacccggacctgggcctgaccctgaaaaacgcc
ctgcggctgcggaacgcctccaccctggagttcatgtgcatgatgtgctgcaggaaggtg
gaggacaagcagaggtggctggaggcctttgccaaggagagacagagggtgaaggaggac
caggagatgggaatagacatcagcgacgagcaaagaaaacaggccatcgctaatgccaga
agaccaaaacatggaaagatcaaaaccgtaggctacgccgactctgtcccgccacaccaa
aacctgccccccctccagcagcgccacatcaccattcccaccagcgtgcctcagcagcag
gtgttttctctggccgagccccccagacgaaagccttaccacctgctgtacagcatcact
cgcagcgccttattcaggaaatga
DBGET
integrated database retrieval system
