Poecilia reticulata (guppy): 103456620
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Entry
103456620 CDS
T05149
Symbol
pan3
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103456620 (pan3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103456620 (pan3)
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103456620 (pan3)
mRNA degradation factors
3'-5' decay
Pan complex
103456620 (pan3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf-CCCH_4
zf_CCCH_4
Torus
Pkinase
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
103456620
NCBI-ProteinID:
XP_008394502
UniProt:
A0A3P9Q4L9
LinkDB
All DBs
Position
LG20:14713404..14731482
Genome browser
AA seq
792 aa
AA seq
DB search
MNSGLPPSAAPLGGAGIPSVKVKFCRYYAKDKTCFYGDECQFLHEDPSMGSMSLHGGGGS
PVPLPMAGGGGTPAGYSLGGTATVCPGGGGTGVSKKSEALGPTGTALEGQLLTIPGMEGP
ALSDANLTNSYFSSSFIGVNGFGSPAESKYTMMQRMTTSSSSPSLLNDGTKNFSHSTHDP
VNSSTSSLFSDFGALSISQRRKAPNPAASEFIPKGAPRMAAMTQSAVQPFPSPLFAHPGL
GGSTAALAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPANYMVPTTAADQGAHIIQ
KETVGGTTYFYTDNTPVPMAGMVFPTFHIYPPTAPHVAYMQPKANAPSFFMADELRQELI
HRHLITMAQIDHSENPDVPSEVDSYHSLFPLEPLPPPNRMQKTSNFSYITSCYKAVNSKD
DLPYCLRRIHGFRLVNTKCMMLVDMWKKIQHSNTVTLREVFTTKAFGDHSLVFSYDFHAG
AETMFSRHFNDPAADSYFTKRKWGQHEPPPPRQHAGLLPESLIWAYIVQLSSALRTIHTA
GLACRVMDPSKILITGKTRLRVNCVGVFDVLTFDNSQTNHLALMPQYQQADLVSLGKVVL
ALACNSLAGIQRENLQKAMELVSINYSSDLKNLILYLLTDQSRLRSVNDIMPMIGARFYT
QLDASQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPAWSETGDRYLLKLFR
DHLFHQVTEAGTPWIDLSHIVSCLNKLDAGVPEKISLVSRDEKSVLVVTYSDLKRCFDST
FQELQAAAAGSL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcggacttccaccttccgctgctccgctcgggggtgccgggatacccagtgtc
aaggtgaagttttgccgatactacgcgaaagacaaaacctgcttttacggagatgagtgc
cagttcctgcacgaggatccctccatgggaagcatgtcgctgcacggaggtggcggcagc
cccgtcccgctgcccatggccggaggtggcgggacgccagcggggtattccctcggtggt
acggcgacggtctgcccaggcggtggagggactggagtgtccaagaaaagcgaagcactc
gggcctacaggcacggctttggaggggcagctgctaaccatcccagggatggagggtcca
gcccttagcgacgccaatctcaccaactcttatttcagcagcagcttcattggcgtcaat
gggtttggaagccctgcagagtcgaaatatacaatgatgcagcgaatgactaccagcagc
agctctcccagtcttctcaatgatggtaccaagaatttcagccacagcactcatgatccg
gtaaactcctcgacttcgtcactgttcagtgattttggtgctcttagcatttcccagagg
agaaaggctcctaaccccgctgcaagtgagttcatccctaagggcgctccgcgaatggct
gccatgacgcagtctgcggttcagcccttcccttctccgctctttgctcatcctggcctc
ggtggctccacagctgctttggcgccaggtatgtctttgtctgctggatcatctcctctc
cactccccaaagatcacacctcacacctcacctgcccctcgtcgacggagtcatacccca
aaccccgccaactacatggtgcccaccactgcggccgaccagggcgcccacatcatccag
aaagagaccgtaggcgggacaacgtacttctacacagataacaccccagtgccaatggca
gggatggtgtttcctaccttccacatctacccccccactgcccctcatgtggcttacatg
cagccgaaagccaatgccccgtccttcttcatggctgatgagctccgacaggagctgatt
cacaggcacctgataaccatggcccaaatcgaccactcagagaacccagacgtaccgtct
gaagtggacagctaccacagcctgtttcccctcgagcctctccccccgccgaaccgcatg
cagaaaaccagcaacttcagctacatcacctcctgctacaaggcggtcaacagcaaggat
gacctgccatactgcctgaggaggatacacggtttccgccttgttaatacaaagtgtatg
atgctggtagacatgtggaagaagattcagcactcaaacacggtgacacttagagaggtc
ttcaccacaaaggcctttggagaccactcactggtcttctcatacgacttccatgcaggt
gcagaaacgatgttcagcaggcattttaatgacccagcggcggactcatacttcacaaag
aggaagtgggggcaacatgaacctccgccaccgcggcagcatgcaggccttctgccggag
tcgctgatctgggcctacatcgtccagctaagctcggccttgcggaccatccacacggcc
ggtcttgcctgtcgggtcatggaccccagcaaaatactcatcactggtaaaaccaggtta
cgggtgaactgcgtcggggtgtttgatgtcttaacatttgacaacagtcagaccaatcat
cttgccctgatgccgcaataccagcaagcagatctagtttccctgggcaaggtggtgctg
gctttggcctgtaattcgctggctggaatccagagggagaacctgcagaaggccatggag
ctggtttctataaactactcttcagacctcaagaaccttattctgtatctgctgactgat
cagtctcggctgcgcagcgtcaatgacatcatgcccatgattggggcacgattctacacg
caactcgatgcatcgcagatgcgaaatgacgtcatcgaggaggaccttgccaaggaggtg
caaaatggtcgccttttccgcctgcttgccaaactgggaaccatcaacgaacggcctgag
tttcagaaggacccggcgtggtcggagaccggcgaccgctacctgctgaagcttttccgg
gatcacctgttccaccaggtgacggaggcggggacgccgtggattgacctcagccatatt
gtctcctgcctcaacaaactggacgcgggtgttcctgagaagatcagcttggtgtcccgg
gatgagaagagcgtcctggtggtcacctattcggacctgaagcgctgtttcgacagcacc
ttccaggagctgcaggccgcagccgctggctctctgtag
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