Poecilia reticulata (guppy): 103456688
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Entry
103456688 CDS
T05149
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1
KO
K10980
non-homologous end-joining factor 1
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
103456688 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pret03400
]
103456688 (nhej1)
DNA repair and recombination proteins [BR:
pret03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
103456688 (nhej1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
103456688
NCBI-ProteinID:
XP_008394625
UniProt:
A0A3P9PIU2
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Position
LG2:complement(20917418..20927973)
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AA seq
315 aa
AA seq
DB search
MNPRADPADDFLLQQPWLPVCIDSCQLLVKSWFGDAEYHILLTDMQGVWEERMDAAAIER
RAQELNRRLRAAVQAFFSHLREAAEPWLSGGGSGEAQMCVWRRDGAVTLKLKSELAGLPF
HWEFHCGPAPVSLVCAQLVRPLLAMSRLMHRQVEELGELLARKDEEIQDYRENGATLSRE
RLQTDVFNKQLYTEDFIQKNLPVLRSDQSHALGFNTDLQQLYAAVTAHCPTPHKRRRPQE
NHGDPDWTEPGPPEPEPPAQTTVIGPDGGDPENQNPGTPVGPGGAAQVRAPAVGATRPAE
RQSSKLKKKKVGLFR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccagagcagatccagctgaygacttcctcctccagcagccctggcttcctgtc
tgtatcgacagctgccagctgctggtcaagagctggttcggcgacgcagagtaccacatc
ctgctgaccgacatgcagggcgtgtgggaggagcggatggatgcagcggccattgagcgt
cgggcgcaggagctgaaccggcgtctgcgcgccgccgtccaggccttcttctcccacctg
cgtgaggcggctgagccctggctgtcggggggaggcagcggcgaggcccagatgtgtgtg
tggcggcgtgacggggccgtgaccttgaagctgaagagtgagctggctggcctgccgttc
cactgggagttccactgcggccccgctcctgtgtctctggtgtgcgctcagctggtgcgc
cccctgctggccatgagccgcctgatgcacaggcaggtggaggagctgggagagctgctg
gccaggaaggacgaggagatccaggactaccgggagaacggagccacgctcagcagagag
cgcctgcagacggatgttttcaacaaacagctctacacagaggacttcattcagaagaac
cttcctgtgctgcggtccgatcagtcccacgctctgggattcaacactgacctgcagcag
ctctacgccgccgtcactgctcactgccccacaccgcacaaacgcagacgaccccaggag
aaccacggcgacccggactggacagaaccaggaccgccagaaccagaaccaccagcacag
actacagtgattggacctgatggaggcgacccagagaaccagaaccccggcaccccagtt
ggaccaggtggtgcggcgcaggtcagggctccggccgtcggcgcaactcgccctgcagag
cgacagtcctctaaactaaagaagaagaaagtgggcctgttccgatga
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