Poecilia reticulata (guppy): 103456834
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Entry
103456834 CDS
T05149
Symbol
smarcd3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103456834 (smarcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pret03021
]
103456834 (smarcd3)
03036 Chromosome and associated proteins [BR:
pret03036
]
103456834 (smarcd3)
Transcription machinery [BR:
pret03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103456834 (smarcd3)
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103456834 (smarcd3)
PBAF complex
103456834 (smarcd3)
GBAF(ncBAF) complex
103456834 (smarcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
TFIIA
SWIB_eIF2D
NPC1_MLD
Ribosomal_uS5m_N
Motif
Other DBs
NCBI-GeneID:
103456834
NCBI-ProteinID:
XP_008394859
LinkDB
All DBs
Position
LG20:complement(21780431..21831646)
Genome browser
AA seq
517 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
PSPVMEPSRKRPAPSQQVQQQQQQQQQQQQQQAVQNRARKKPVGFPGASEMPARQMDMRE
PQSDPTLGSNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEAL
KRPMKQQKRKLRLYISNTFNPARPDADDSDGSIASWELRVEGKLLDDPGKQKKKFSSFFK
SLVIELDKELYGPDNHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLD
LRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIP
QRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKSQMSSFLLSTANQQEIA
SLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERR
AAFYHEPWSQEAVSRYFYCKIQQRRQELEQALAVRNT
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggagacggcggggggagccaggaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggcatgccgtctggagcgaggatgccccaccaagga
gcccccatggggcctcctggccccccgtatggagggagtccggcagtgcggcctggcctg
ccctccccggtgatggagccgagtcgtaagcggcctgccccgtcccagcaggtccagcag
cagcaacagcagcagcaacagcagcagcagcagcaggccgtgcagaaccgcgccagaaag
aagccagttggatttcccggagccagcgagatgccggcgaggcagatggacatgagagag
ccccaatcagatcccacgcttggatcaaatgctaagagaaggaaaatggcagacaagatt
cttccgcaaaggatccgggaactggtacctgaatctcaggcctacatggatctactggct
ttcgagcgcaaactggaccaaaccattatgcgtaaacgtgtcgacatccaggaagctctg
aagagaccaatgaagcagcaaaagcgtaaactaaggctctatatttccaatacgttcaac
ccagctcgacctgacgctgatgactcggatggcagcattgcgtcatgggagctgagggta
gagggaaagctgctggatgatccggggaagcagaagaagaagttttcttccttttttaag
agcttggtgatcgagctggacaaagagctgtacggtccggacaaccacctggttgagtgg
caccgcacacccaccactcaggagacagacggcttccaggtgaagagaccgggagatgtg
agcgtgcgctgtaccctgctgctgatgctggactaccagcctccccagtttaagctggac
ctgcgcctggcgcgcctgctgggcatccacactcagactcgctcctgcatcattcaggcc
ctctggcagtacgtgaagaccaacaagctgcaggactcgcatgataaagagtacatcaac
tgtgacaagtacttccaacagattttcgactgtcctcgccttaagttctctgagattcct
cagcgcctcactaacctcctgctaccgcccgaccccatcgtcatcaaccatgtcatcagc
gttgaccccaacgaccagaagaagacggcctgctacgacattgacgtggaggtggaagac
cccctcaagagccagatgagcagcttcctcctctccaccgccaaccagcaggaaatcgcc
tccctcgacaacaagatccatgagaccatcgagtccatcaaccagctgaagatccaacgg
gactttatgctcagcttctccagagatcccaaaggctacatccaagactggctcaagtcc
caaagccgagacctcaagttgatgaccgatgtggtggggaaccctgaggaggagcggagg
gcagcattttaccacgaaccctggtctcaggaggcggtcagccgctacttctactgcaag
atccagcagaggagacaggagctggaacaggccttagcagttcgcaacacctaa
DBGET
integrated database retrieval system
