Poecilia reticulata (guppy): 103456900
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Entry
103456900 CDS
T05149
Symbol
shh
Name
(RefSeq) sonic hedgehog protein isoform X1
KO
K11988
sonic hedgehog
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
103456900 (shh)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pret01002
]
103456900 (shh)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pret00536
]
103456900 (shh)
Peptidases and inhibitors [BR:
pret01002
]
Cysteine peptidases
Family C46: hedgehog family
103456900 (shh)
Glycosaminoglycan binding proteins [BR:
pret00536
]
Heparan sulfate / Heparin
Morphogens
103456900 (shh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Intein_splicing
Peptidase_M15_3
Hint_2
Vint
Hom_end_hint
Motif
Other DBs
NCBI-GeneID:
103456900
NCBI-ProteinID:
XP_008394967
LinkDB
All DBs
Position
LG20:23544487..23554448
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AA seq
411 aa
AA seq
DB search
MHQRWTRIASVALICLSLVSSAVGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGAS
GRYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRMMTQRCKDKLNSLAISVMNQWPG
VKLRVTEGWDEDGHHFDESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKA
HIHCSVKAENSVAAKSGGCFPGSSTVTLQDGTKKPVRDLQPGDRVLAADGDGNPIFTDFI
MFIDRDSTTRRTFYVIETETGQKITLTAAHLIFVARENSTRSATFASDVRPGQKVFVYDG
ERSRVVAVNVKRIYTQEHEGSFAPVTAKGTVVVDQVLASCYAVIEDHELAHWALAPVRIA
HWVSSSLFVSRPRVSAHNEGVHWYSKLLYQLGTWLLDDHSIHPLGMSAYPS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagcgctggaccagaatcgcttctgtcgctctcatctgcttgtccttggtgtcc
tccgcggtgggatgcggaccgggcaggggctacggcaggaggagacaccccaagaagctg
acacctctggcgtacaagcagttcatccccaacgtggcggagaagaccctgggggcgagc
ggtagatacgagggcaagatcacacggaactccgagcgctttaaagagctcactcccaat
tataacacagacatcatcttcaaggatgaggagaacacaggagccgacaggatgatgact
cagagatgcaaggacaagctgaactcgctggccatctctgtgatgaaccagtggcctggg
gtgaagctccgggtcacagagggctgggacgaggacgggcaccacttcgacgagtccctg
cactacgagggcagggccgtggacatcaccacctcggacagagacaagagcaaatatggc
accttgtccaggctcgccgtggaagccggatttgactgggtctactatgagtcaaaggcc
cacatccactgctcagtgaaagcagaaaattcagtagcagcaaagtcaggcggctgcttc
ccgggatcctccacagtcaccctgcaggacggcaccaagaagccggtcagagacctccaa
cctggggacagagtcctggctgcggacggcgacggaaacccgatcttcaccgacttcatc
atgttcatagaccgagactccaccaccaggaggaccttctacgtgatcgagaccgagacg
ggccagaagatcaccctcactgccgcgcacctcatcttcgtcgcccgcgagaactccacg
cggtcggcgacgttcgccagcgacgtgcgaccgggacagaaggtgttcgtctacgacggg
gagcggagtcgagtcgtggccgtgaacgtgaaacggatttacacgcaagagcacgagggc
tccttcgcgcccgtgacggctaaggggaccgtggtggtggatcaggttctggcgtcctgt
tacgcggtgatcgaggaccacgagcttgcgcactgggccctggcgcccgttaggatcgcc
cactgggtgtcctcatcgctgttcgtctcccggcctcgggtcagcgcgcacaacgagggg
gtgcactggtactccaaactcctttaccagctggggacgtggctcttggacgaccactcg
atccatccactggggatgtcagcatatccaagctga
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