Poecilia reticulata (guppy): 103456922
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Entry
103456922 CDS
T05149
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pret04040
]
103456922 (trpc1)
Ion channels [BR:
pret04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103456922 (trpc1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
103456922
NCBI-ProteinID:
XP_008395027
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All DBs
Position
LG20:complement(24104732..24144035)
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AA seq
810 aa
AA seq
DB search
MHISAWPYSLSVVMAALYQGTDTSSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENRHGELNVNCVDVLGRDAVTIAIENENLDILQLLLEYGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAVSPLLLQKLMQRIQNPEYSTTMDVAPVILAAHRNNYEIL
TMLLKQDISLPRPHAVGCECMLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPIL
RAFELSADLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSSDDHV
DKRGLLEERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTCLKMVTVL
SLALLWPLLSICYLLVPRSRVGQIIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEGKKNM
MGPPLEMIDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLAAFTLRIV
AHSKFKNCKNETDTLDRKDWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQIS
MGQMLQEFGKFLGLFLLVLFSFTIGLTQLYGKDHAKDTKDQINQTKDCEGIFCQQQSNDA
FHTFMGTCYALFWYIFSLAHVALFVTRISYTEELRSFVGALIIGTYNIVVVIVLTKLLVA
MLHKSFRQIANHEDKEWKFARAKLWLSYFDDKCTLPPPLNVLTSPKTVCYLVTSMRKWIC
SHTSKGKVKRQNSLKEWKNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSMDQATVENLND
LRQDLSKFRNEMRDLLGFRTSKYAMFYPRS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgcttggccgtactcgctctccgtcgtaatggcagctctgtaccagggc
acggacacctcctcccccgacaaattcctggccttgaaagacgtgagagaagtaaaagag
gagacgacgctggacgagaagctcttcctgctggcatgcgagaaaggtgactattacatg
gtgaagaagctgctggaggagaaccgccacggggagctcaacgtcaactgtgtggatgtg
ctgggccgggacgcggtgaccatcgccatcgagaacgaaaacctggacatcctgcagctt
ctgctcgagtacggctgccaggccacagatgccttgctggtggccatagactcggaggtt
gtgggtgctgtggacatcctcctcaaccacagaccaagacgctcctccaagccttctatc
gctgtaagtcccctgttattgcagaaactgatgcagcggatccagaacccagagtactcc
accaccatggatgtggctccagtaatcctggcagcacacagaaataattatgagatcctc
accatgctgctaaaacaggacatctccctcccgcggcctcacgctgtaggctgcgagtgc
atgctgtgcaatgctaaaaacaagaaggacagcttaaggcactccaggttccgactcgac
atctaccgctgcctggcgagcccctcccttatcatgctgaccgaggaggaccccatacta
cgagcatttgagctcagcgcagacctgaaggagctcagccttgtcgaggtcgaattcagg
aatgactacgaagagctggcgaaacagtgcaagatgtttgccaaggatcttctggctcag
gctcgaaactctcgagagctggaagtgattctcaatcacacctccagcgacgatcatgtt
gacaagaggggcctgctggaggagcgcatgaaccttagccggcttaagctggccatcaag
tacaaccaaaaagagttcgtggctcagtccaactgtcagcagttcctcaacaccgtctgg
ttcggagagatggccagctaccgacggaagcacacctgtttgaagatggtcacggtcctg
agcctggcactgctctggccgctcctctccatctgctacctgctggtgccccgctcccga
gtcggccagataatccacacgccgttcgtgaagttcatcatccacagcgcctcttatttc
accttcctgctgctgctcaacctgtactctctggtctacaatgagggcaagaagaacatg
atgggccccccactcgagatgattgattacctgctgatcctctggataataggaatggtg
tggtcggacgtgaaacgtttatggtacgaagggctggaagactttctggaagagtccaga
aaccagctgagttttgtgatgaattcgctctacctggcagccttcactcttagaatagtt
gctcatagcaagttcaaaaattgcaaaaatgaaacagacacactagacaggaaggactgg
gacgccttccatcccatcctggttgccgagggcctcttcgccttcgccaacgttctgagt
tacctgagactcttcttcatgtacaccaccagctccattctggggccacttcagatctcc
atgggtcagatgctgcaggagtttgggaagtttctgggcctcttcctgcttgtgttgttc
tccttcaccattgggttgactcagctctacggaaaagaccacgctaaagacacaaaggac
cagattaaccaaaccaaggactgtgagggcatcttctgccagcaacagagcaacgatgca
tttcacacgtttatggggacctgctatgctctgttctggtacattttctccttggcgcac
gttgcgctcttcgtcacccgcatcagctacacagaggagctgcgctcctttgttggtgcc
ctgatcataggcacctacaacatcgtggtggtcatcgtgctgaccaagctgctcgtggcc
atgctccataaaagcttcagacaaattgctaatcatgaggataaggagtggaagtttgca
cgggccaaactgtggctcagctactttgacgacaagtgtaccctgccccctcctctcaat
gtcctaacctcgccaaaaaccgtttgctacctggtgaccagcatgagaaagtggatctgc
tctcacacctcaaagggcaaagtgaagagacagaacagtctcaaggagtggaagaacctg
aaacagaagcgtgacgagaactaccagaagatcatgtgctgtctggtacaccgctacctg
acctccacgcggcagaagatgcagagcatggatcaagccacggtggaaaatctgaacgac
ctacgccaagacctgtccaagtttcgcaacgagatgagggacctgctgggcttccggaca
tccaaatacgccatgttctacccaaggagttaa
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