Poecilia reticulata (guppy): 103457575
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Entry
103457575 CDS
T05149
Symbol
fdft1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret00100
Steroid biosynthesis
pret01100
Metabolic pathways
Module
pret_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
103457575 (fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pret01006
]
103457575 (fdft1)
Enzymes [BR:
pret01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
103457575 (fdft1)
Prenyltransferases [BR:
pret01006
]
Terpene biosynthesis
Squalene/phytoene synthase
103457575 (fdft1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
GBP_C
HAUS4
Motif
Other DBs
NCBI-GeneID:
103457575
NCBI-ProteinID:
XP_008396055
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All DBs
Position
LG21:7079021..7085345
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AA seq
457 aa
AA seq
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MAGACCKCPASLSVLKRSLSVAPRGCGSAPPRSVLQGWRRRGERGLQEATRPSSALRAAG
FYRQTAFLCLSCQESMSDSLRTCYVYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALD
TVEDDMTIPLEKKVPMLNNFHTYLYQEEWCFTESHEKDRQVLEDFPTISLEFRNLAQEYR
DVICDICHRMGVGMAEFLEKKVGCMKEWDLYCHYVAGLVGIGLSRLFSASQLEDPEVGRD
TELANSMGLFLQKTNIIRDYLEDTQEGRAFWPKEAWSQFASRLEDLAQPEKLESALSCLN
LLVTDALRHVPDVISYLSRLRNQSVFNFCAIPQVMAIATLSTCYNNPMVFQGVVKIRKGQ
AVTLMMEATNMRAVQSIIAQYSQEILQKVSLTDPTRDKTLHILAVIQEKSALPQPDLSSR
NHHLSPVYLSAAMLLAALSWQYLSTTAAQAQGTGDMQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcctgctgcaaatgtccggcctctctgtccgtgttgaagcgctctctctcg
gtggcgccgcgaggctgcggctccgctcccccgcggtccgtcctgcagggctggaggagg
cgcggggagaggggcctgcaggaggccaccagacccagtagcgccctcagagccgcgggt
ttctaccgacaaacagcctttctttgtctctcctgccaggagtccatgagcgacagcctg
cggacctgctacgtatatctgaatcagaccagcaggagctttgcggccgtgattcaggcg
ctggacggagagctgagacatgcggtttgcatcttctacctggtgcttcgtgcactggac
acagttgaggacgacatgaccatccctctggagaagaaggtgcccatgcttaacaatttc
cacacctacctgtaccaggaggagtggtgcttcactgagagccatgaaaaggaccgtcaa
gttctggaggatttccctacgatatcactggaatttagaaacctcgctcaggaatacaga
gacgtcatctgcgatatctgccaccggatgggagtcgggatggctgaatttctggagaag
aaggtgggatgcatgaaggagtgggacctgtactgccactacgttgccggtctcgtcggc
atcggtctgtcgcggctcttctctgcctcccagctggaggatccggaggtgggacgggac
acggagctggcaaactcaatgggcctgttcctgcagaaaaccaacatcatccgagactat
ctggaagatactcaggagggacgggccttctggccaaaagaggcgtggagccagtttgcg
agccgtctggaggatctagcccagcccgagaagctggagtcggctctgtcctgcctcaac
ctgctggtcaccgacgctctgcgtcacgtccccgacgtcatctcctacctgtctcggctg
cgcaaccaaagcgtcttcaatttctgcgccattccacaagtgatggcaatagctaccctc
tcaacgtgctacaacaacccgatggtgtttcagggtgtggtgaagatcagaaagggacag
gctgtcaccctcatgatggaagccaccaacatgagagcagtgcagagcatcatcgcccag
tacagccaagagatcttacagaaggtctccctcaccgatccgacgcgggacaaaacgctg
cacatcctggctgtgatccaggagaaatcggcccttcctcaacccgacctcagctccagg
aaccaccacctgtctcctgtgtacctgtcggctgccatgctgctggccgcgctgagctgg
cagtatctcagtacgacagctgcccaggcgcagggcacaggggacatgcagtga
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