Poecilia reticulata (guppy): 103457668
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Entry
103457668 CDS
T05149
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103457668 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103457668 (hbs1l)
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103457668 (hbs1l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
GTP_EFTU_D4
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
103457668
NCBI-ProteinID:
XP_017157784
UniProt:
A0A3P9P496
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Position
21:complement(13822338..13847504)
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AA seq
702 aa
AA seq
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MSRHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPATANQFIYSRRELQAPKEEPLEEEEF
EDEDVPMSPCVDFNLDPLNQAKLFSCLDHMRAVLGDAVPDSVLTQAAMKHGFDPQRALDA
VLSEDSKTAPVTRSAAEDMTPVGRVAQEQTPLPQRTKQEAVAEKAKSRDAAPDKLDSEVV
PKVARMTVSGKKQTMGFDVPSSGENGVVASPARRGDSPENTKATLVPEVTPKRPETPSKA
SNGDEVSAAATPGRSSGKTRQAINIKAELERRQGGKPLLNLVVIGHVDAGKSTLMGHMLY
LLGNVNKRTMHKYEQESRKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETNSKVVTL
MDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLA
VAVNKMDQVNWQQERFQEISSKLGHFLKQAGFKESDVFFVPTSGLSGENLTARSTVSELK
SWYSGHSLLEQIDAFKAPQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGFIQTGDKILA
MPPNETCTVKGITLHDEALDWAVAGDHVSLTVTGMDIIKINVGCVFCDPKEAIRVCTRFR
ARILLFNIEVPITQGFPVLLHYQTVSEPATIKKLISVLHKSSGEVLKKKPKCLSKGMNAI
VEIQTQRPVSLELYKDYKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccacagaaatgttcgaggttacaactacgatgaagactttgaagatgacgac
gtgtatggacagtctgtggaggatgactactgcatttcaccagcaacagccaatcagttc
atctattcacgccgagagcttcaagcacctaaagaggagcctctggaggaggaagaattt
gaagatgaggatgttcccatgtccccttgtgttgacttcaaccttgaccctcttaatcaa
gcgaagctgttctcctgtctggaccacatgcgagcagtactgggagatgcagtgcccgac
tccgtcctgacccaggctgccatgaaacacggatttgatccacagagggctctggacgca
gtgctgtctgaagacagtaaaacagcaccggttaccagaagtgcagctgaagacatgacg
ccggtgggccgagttgcacaagagcagacgcctcttccacagagaaccaagcaggaggcc
gtcgctgagaaagctaaaagcagagatgcggctcccgataaactggactccgaagtggtt
cccaaagtggccagaatgaccgtctctggcaagaagcagactatgggcttcgatgttccc
agctcaggggaaaacggcgttgtcgccagcccagcacggcgaggtgacagccccgaaaac
accaaggcgactctggtccccgaggtcacacccaaacgacccgagactccatccaaagcg
tcaaatggagacgaagtctccgccgctgctacgccaggacgctcctccggaaagacgcgg
caggcgatcaacatcaaggcagagctggagaggagacaagggggcaaacctctgttaaat
ttagtagtaataggtcatgtggacgcaggtaagagcaccctgatgggccacatgctttat
ctgctggggaacgtcaacaagcgcaccatgcacaagtacgaacaggagtcgagaaaggct
ggaaaggcctcctttgcctacgcctgggttctggatgaaaccggcgaggagagggacaga
ggggtgacaatggatgtgggcatgacgaagtttgagacaaactctaaggtggtgactcta
atggacgctccgggacacaaagacttcattcccaacatgatcacaggcgctgcacaggcc
gacgtcgcggtgctcgtggtggacgccagcagaggagagttcgaggcgggctttgaagca
ggcggtcagaccagagagcacgccctgctggtgcgttcgctgggtgtcactcagctggcc
gtagctgtcaacaagatggaccaggtaaactggcaacaggagcgtttccaagaaatcagc
tcaaaacttggccattttctgaagcaggcgggattcaaggagtccgatgttttcttcgtc
cccaccagcggcctctcaggagaaaatctcactgcaagaagcacagtatcagagctgaag
tcttggtacagcggacacagcctgctggagcagattgatgcattcaaagcccctcagcgg
tcaatagacaaacctttcagactatgcgtctcagatgtgttcaaagaccagggatcaggc
ttctgtgttacagggaagattgaggctggttttattcagacaggagacaaaatactggca
atgcctcccaatgaaacctgcacagttaaaggaatcactcttcacgatgaggcgctggac
tgggccgtagccggagaccacgtcagcctcacagtgactggaatggacatcatcaagatt
aatgtcggctgtgtgttctgtgaccccaaggaggcgattcgagtctgtactcgattcaga
gccagaatcctgctcttcaatatcgaggttcccatcacacaaggctttccagtactgttg
cattaccagacagtcagcgagccggccactattaagaaactaatcagcgttctgcacaag
agcagtggtgaagtcctaaagaagaagccaaagtgtttgagtaagggcatgaatgcgatt
gtggagattcagacccagaggccggtgtcattggagctgtacaaggactacaaagaactg
ggccgcttcatgttgagatacgtcggctccaccatcgctgcaggtgtcgtcacagagatc
aaagaatga
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