Poecilia reticulata (guppy): 103457668
Help
Entry
103457668 CDS
T05149
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X2
KO
K14416
elongation factor 1 alpha-like protein
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103457668 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103457668 (hbs1l)
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103457668 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBS1_N
CRF1
Motif
Other DBs
NCBI-GeneID:
103457668
NCBI-ProteinID:
XP_008396188
UniProt:
A0A3P9P4Q2
LinkDB
All DBs
Position
LG21:complement(13703079..13728240)
Genome browser
AA seq
643 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPATANQFIYSRRELQAPKEEPLEEEEF
EDEDVPMSPCVDFNLDPLNQAKLFSCLDHMRAVLGDAVPDSVLTQAAMKHGFDPQRALDA
VLSEDSKTAPVTRSAAEDMTPVGRVAQEQTPLPQRTKQEAVAEKGACLFHTDNTPRAHKA
TQPSEVNMQNVLLQHKPDPANSSSVKENIHPESDRLGISCGTSLAQLMSEHEHKSKTGVS
DTRQGLAVSSLSTLPLASNCQMTTASSRSGFSLGTLTSLQTTSTPQKPTPSILFVSLGNL
SLNSPNVSTASSTLAPPPGFGSLSSVRNYSPLSVVDPKGGPSLADLIQEHSNRSPTLQSS
LLTPANQGNAAPSLSDLAFQHQKRGIHSESQGTGRSPNTNSSPFHLGGTVTLSDLAQQHE
TNCASASFLAAGTESRASALKQAPGLSELLSSSHLLSEHKGETSTTSNGSLGTLSSLVSP
AKPERADVLAQSTKEGGTERKPDHKPPQQVFSPSKPGQAIDLSRLMEQANRMSPHHLDCD
FSSPSSPTPTFGLGQDLSVFAKPSVFAIALSFQSYRQRRTRRKLIKGKIQGQKTKSAYQS
FLLKPQNKSKEHCPPLFPIVPFRFDSPSPDDIVRANQSKAFTR
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccacagaaatgttcgaggttacaactacgatgaagactttgaagatgacgac
gtgtatggacagtctgtggaggatgactactgcatttcaccagcaacagccaatcagttc
atctattcacgccgagagcttcaagcacctaaagaggagcctctggaggaggaagaattt
gaagatgaggatgttcccatgtccccttgtgttgacttcaaccttgaccctcttaatcaa
gcgaagctgttctcctgtctggaccacatgcgagcagtactgggagatgcagtgcccgac
tccgtcctgacccaggctgccatgaaacacggatttgatccacagagggctctggacgca
gtgctgtctgaagacagtaaaacagcaccggttaccagaagtgcagctgaagacatgacg
ccggtgggccgagttgcacaagagcagacgcctcttccacagagaaccaagcaggaggcc
gtcgctgagaaaggagcctgcttgtttcacacagacaacacacccagggcacacaaagct
acacaaccaagtgaagtcaatatgcagaacgtcttattgcaacataaacctgacccggcg
aacagcagctctgtcaaggaaaacattcaccctgaaagtgatcgtttaggcatcagttgt
ggtaccagtttggctcagctcatgtctgagcatgagcacaagagtaaaacaggagttagt
gatacaaggcaagggttggctgtttcatctttgagcactttaccattagcatctaattgc
caaatgacaactgcgtctagtcggagtggcttttcacttggaacactgacatctttacaa
acaacttcaacgccacaaaaaccgactccctccatcctttttgtctcgctcggtaatctg
tcgctaaacagtccaaacgtgtctacagcaagctccactctggctcctcctcctgggttc
ggaagcctcagttctgtcaggaattacagtccgctctcagttgtagaccctaaaggaggc
ccatctttggccgatttaatccaagaacactcgaaccgcagtccaactttgcaaagctca
ctgctcacccctgctaaccaggggaatgctgcaccctccttgtctgacctagcttttcag
catcaaaaaagagggattcactctgaatctcaaggcactggaagatcaccaaacacgaac
tcttccccgtttcatctgggtggtactgtcacactgtcagatctagcccagcagcatgaa
accaactgtgcctctgcctcctttctggccgccggcactgaatctcgagcaagtgcactg
aaacaagcacctggcctctcggagctgctttcttcgtcacatttactatctgaacataaa
ggcgaaacctcaaccacctcaaatgggtcgctaggcaccctcagctcccttgtgtcacca
gcaaaaccagagagggctgatgtgttggcacaaagtactaaagagggtggaactgagcgc
aagcctgaccacaaaccaccccagcaggtcttcagcccatctaagccaggtcaagctatc
gatttgagcagactcatggagcaggccaacagaatgagccctcatcacctcgactgcgac
ttctcctcaccgtcgtctccgactccaacttttggcttgggacaagatttgtctgttttt
gcaaaaccttcagtatttgcgatcgctttgtcgtttcagagttacaggcaaaggaggacg
aggagaaagctaataaaaggaaaaatacaaggccagaagacaaaaagtgcttatcagtcc
ttccttctcaaaccacaaaacaagtccaaagagcattgccccccactttttcctattgta
cctttccgttttgattctccttcacctgacgatattgttcgagctaatcaaagcaaagct
ttcacacggtag
DBGET
integrated database retrieval system
