Poecilia reticulata (guppy): 103457684
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Entry
103457684 CDS
T05149
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pret03041
]
103457684 (ddx1)
03016 Transfer RNA biogenesis [BR:
pret03016
]
103457684 (ddx1)
Enzymes [BR:
pret01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103457684 (ddx1)
Spliceosome [BR:
pret03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103457684 (ddx1)
Transfer RNA biogenesis [BR:
pret03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
103457684 (ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
Motif
Other DBs
NCBI-GeneID:
103457684
NCBI-ProteinID:
XP_008396224
UniProt:
A0A3P9P6T4
LinkDB
All DBs
Position
LG21:14225979..14232106
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AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGRAAVKTGGTIFNTWQMNPYDRSPAFAIGPDGLCCQSREFKEWH
GCRSTKGVTKGKYCYEVTCHDQGLCRVGWSTSQAALDLGTDKYGFGFGGTGKKSNNKQFD
SYGEEFTMHDTIGCYLDLDKGQISFSKNGNDLGSAFDIPQNLSSQGFFASCVLKNAELKF
NFGGEDFKHPPKSGFVALDQAPESHTIKSSQTGSAKVTQVKASSNAAKALIIEPSKELAE
QTFNNVKQFKKNVENPKLRELLVIGGVAAKEQLAILEQGVDIVVGTPGRLDDLVSTGKLS
LSQVRFLVLDECDGLLTAGYTDFINRIHKQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE
RIMHFPTWVDLKGEDSVPETVHHVVVPVNPKADRQWERLGKNHIRTDEVHAKDNTRPGAN
TPEMWSEAIKKLKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDSKGHQF
SCVCLHGDRKPNERKNNLDRFKRKDVKLLICTDVAARGIDVSGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAMEKEKVWYHVCQNRGRGCYNTRLKEDGGCTIWYNEKELLS
EIEEHLKCTITQCDTDIKVPVDEFDGKVSYGQRRALGGGNYKGHVDVLAPTVQELAVLER
EAQTSFLHLGYMPNQLFRAF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcagccttttctgaaatgggtgttatgcctgaaatcgcgcaggctgtggaggagatg
gattggctactgccaacagatatccaagcagagtccattcccttgattcttggtggagga
gatgttctcatggcagcagaaactggtagtgggaagacaggagcctttagtatcccggtc
atccagattgtctacgaaaccctgaaggatcagcaggagggcaagaagggcagagctgct
gtcaaaactggtggaacaattttcaacacctggcagatgaatccatatgatcgtagccca
gcctttgcaatcggccccgacggactctgctgccagagcagggagttcaaagagtggcac
ggctgccgctccaccaaaggtgtcacaaaagggaagtactgctatgaggtaacctgccat
gaccagggtctctgccgagtgggttggtctaccagtcaagctgctctggatttggggact
gacaagtacggctttggttttggtgggaccggaaagaaatccaacaacaagcaatttgac
agctacggggaggagtttaccatgcatgacactatcgggtgctacctggatttggacaaa
ggccagatctccttctctaaaaatggaaacgacctgggttcggcttttgacatccctcaa
aatttaagcagccagggcttttttgcttcatgcgtcctgaagaatgctgagctgaagttc
aactttggaggagaagacttcaaacatccccctaaaagtgggtttgtcgctctggatcag
gcaccggagagtcacaccattaaatcttcccaaacaggcagtgccaaagtgactcaagtg
aaggcttcatcaaacgcagccaaagccctgatcattgagccatccaaagaactggcagaa
caaaccttcaacaatgtcaagcagtttaagaaaaatgtggaaaatcccaaactaagggag
cttcttgtgatcgggggtgttgcagctaaagagcagctagcaattctggaacagggggta
gacatagtggtgggaacacctggaagactggatgaccttgtttccaccggaaaacttagt
ctgtcccaagtccgtttcctggttctggatgagtgtgatggtctcctaacagccggatac
acagacttcatcaacaggatccataaacaaatccctcaggtcacctctgatggcaagaga
ctgcaggtcatcgtgtgctccgccacactgcattccttcgacgtgaagaagctctccgaa
cgcatcatgcattttcccacctgggtggacctaaaaggcgaggactctgtcccggaaacc
gtccaccacgtggtggtgccggtcaacccaaaggccgaccggcagtgggagcgcctcggc
aagaaccacatccggaccgatgaagttcatgccaaagataacacccgaccaggagccaat
acgccagaaatgtggtcagaagctatcaagaagctgaagggcgagtacacggtcagggcc
atcaaagagcacaaaatggaccaggccataatcttctgtcgcaccaagatcgactgtgac
aacatggagcaatacttcattcagcaaggaggaggtccagacagcaaaggtcaccagttc
tcctgcgtttgccttcatggtgatcgaaagccgaacgagaggaagaataacttggatcgc
ttcaagagaaaagatgtgaagctgctgatctgcacagacgtggccgccagaggaatcgac
gtcagcggcgttccttacgtgattaatgtcaccctgcctgacgagaagcagaactatgtc
catcgtatcggcagagttggtagagcagagagaatgggactcgccatctccctagttgct
atggaaaaagaaaaggtgtggtaccatgtttgtcagaaccgagggagaggctgctacaac
acccgactgaaggaggacggagggtgcaccatatggtacaacgagaaggagcttctttct
gaaatcgaggagcatctgaagtgcaccattactcagtgtgacacagatattaaagtgcct
gtagatgagtttgacggaaaagtgagttatggacagcgcagagctcttggaggcggaaac
tataagggtcacgtggacgttctggccccgacagtccaggagttggccgtccttgagaga
gaagctcaaacatcttttcttcatttaggatacatgccaaaccagctgttcagggccttc
taa
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