Poecilia reticulata (guppy): 103457765
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Entry
103457765 CDS
T05149
Symbol
hmbox1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pret03000
]
103457765 (hmbox1)
Transcription factors [BR:
pret03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
103457765 (hmbox1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
DUF494
HTH_37
AbiJ_NTD3
HTH_31
NOC3p
Motif
Other DBs
NCBI-GeneID:
103457765
NCBI-ProteinID:
XP_008396372
UniProt:
A0A3P9Q580
LinkDB
All DBs
Position
LG21:complement(21280136..21301349)
Genome browser
AA seq
508 aa
AA seq
DB search
MSDFSEEPRFTIEQIDLLQRLRRTGMTKQEILHALDTLDRLDREHGDKFGHRTSSSSSSS
STYLVGGANSSAAKTTATSFNNNATASATTTTTSSSATCNGGEGGDHSSSSLVVAAAVAS
STTSKISTATQTQFNNSGGGLSPSPSNSYDTSPPPGPPPPSAVLPSPVALVALSQNGRDS
LAATPNGKLSPPRYPVNSAAASRAFGFEAAEEDLDVDDKVEELMRRDSSLVKEEIKAFLG
NRRISQAVVAQVTGISQSRISHWLLQHGSDLSEQKKRAFYRWYILEKTTPGATLNMRPAP
LPLEEMEWRQTPPPLATAPGTFRLRRGSRFTWRKECLAVMESYFNDNQYPDEAKREEIAN
ACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEATILESHGIDVQSPGGHS
NSDDIDGNDFAEQACDLPYFDKRPLSRPFGLYRLEPTSPTQDDSAAHNEHQDPISLAVEM
AAVNHTILALSRTGGVPSDIKTESLEDE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacttcagcgaggagccgcgcttcaccatcgagcagatagacctgctgcagcgg
ctgcgtcgcaccggcatgacgaagcaggagatcctgcacgcgctcgacactctggaccgg
ctggaccgggagcacggcgacaagttcggccaccgcacctcttcctcctcctcctcctcg
tccacctacctcgtaggcggggccaacagctccgccgccaaaacgaccgccacatccttc
aacaataacgccactgcctcggcaacaaccaccaccacctcctcctctgcgacgtgcaac
ggcggtgaaggtggygaccactcctcctcctccctcgtcgtcgccgccgccgtcgcctcg
tccaccacctccaaaatctccacggccacgcaaacacagttcaacaacagcggtgggggg
ctgtccccgtcgcccagcaacagctacgacacgtccccgcccccggggccgccaccgccc
tcggccgtgctgccgtcgcccgtggcgctggtggcgctgtcgcagaacgggcgggacagc
ctggcggccacgcccaacgggaaactgtccccgcctcgctacccggtgaacagcgcagcg
gcgtccagggcgttcggcttcgaagctgcagaagaagacctggacgtggatgacaaggtg
gaggagctgatgagaagagacagcagtctggtgaaagaagagatcaaagctttcctgggg
aaccggaggatttctcaggctgtcgtggctcaagtgaccggcatcagccagagcaggatc
tcccattggctgctgcagcacggctccgacctgagcgagcagaagaagagggctttctac
cgctggtacatcctggagaaaaccacgccaggtgccactctgaacatgaggccagcgccg
ctgcctctggaggagatggagtggaggcaaaccccgccgcccctcgccaccgcccccgga
accttccggctgcgccggggaagccgcttcacctggaggaaggagtgcctggctgtgatg
gagagctacttcaatgacaaccagtacccagatgaagccaaaagagaggagatagccaac
gcctgcaatgctgttattcagaaaccagggaagaagctgtctgatctggagagggtgacc
tccctgaaagtctacaactggttcgctaaccggcgcaaggagatcaagagacgagctaat
attgaagcaacaatcctagagagtcatgggatagacgttcagagtccgggtggacactcc
aacagcgacgacatcgatgggaatgactttgcagagcaggcctgcgacctgccctacttc
gacaagagacctctcagccgaccgtttggcctttaccgcctggagcccacctcacctaca
caggacgacagcgcggctcacaacgagcatcaggaccccatctctctggccgtggagatg
gctgccgtcaaccacaccatcttggcgctgtccagaaccggaggcgtgcccagcgacatc
aagaccgagtccctggaggatgaatga
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