Poecilia reticulata (guppy): 103457930
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Entry
103457930 CDS
T05149
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04140
Autophagy - animal
pret04142
Lysosome biogenesis
pret04145
Phagocytosis
pret04148
Efferocytosis
pret05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
103457930 (vps18)
04142 Lysosome biogenesis
103457930 (vps18)
04140 Autophagy - animal
103457930 (vps18)
04148 Efferocytosis
103457930 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103457930 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pret04131
]
103457930 (vps18)
Membrane trafficking [BR:
pret04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
103457930 (vps18)
Hops complex
103457930 (vps18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-RING_5
zf-RING_Vps41
zf-RING_16
aq_1631
zf_RING_Vps8
RBSN_mid
zf-C3HC4_2
zf-RING_2
zf-C3H2C3
zf-ANAPC11
zf-RING_UBOX
zf-RING_11
DUF5600
zf-rbx1
DUF4446
DUF1664
LETM1_C
Apolipoprotein
Motif
Other DBs
NCBI-GeneID:
103457930
NCBI-ProteinID:
XP_008396634
UniProt:
A0A3P9PDV4
LinkDB
All DBs
Position
21:15683045..15689337
Genome browser
AA seq
982 aa
AA seq
DB search
MASILDEYEDSQNIRQSSQQHSRLSSANIGLTHSGFVNVRLEEEKPIFNKQRIDFTPPER
INHLSVCNNQLCMSLGKDTLLRIDLAKPDQLNQTELGRKDDSKVYKLFLDPTGSHLLISL
NTSECLYLNRNTQKVRSLSRWRGHLIESVGWNKLLGNETSTGPILVGTSQGIIFEAEISA
NEGSLFNTNPDQYFRQVHSLEEDGRPAPVCCLEIERSPENKYFIIATTRKRLFQFVGKVA
EGSEQQGLSTIFSQNQDLLPSFQEFPVNMGYSEITFYTAKLRNFPKAFAWMMGNGVLYGQ
LDYIRPDSLLSDVQVWEYTPDIDISQNKPISIVLTQFHFLLLLHDRIKAICTLNGQVVYE
DVFPDKFGPLKRMIKDPIGGLVWIYTERAVFRYHIQRESRDVWQMYMSMNKFDLAKEYCR
DRPECMDMVLAKEAEYCFQNRRYLESAKCYALTQNYFEEIALKFIEAKQEEALKEFLLKK
LNNLKQSERTQITLLVTWLTELYLNRLGQLESDDNSLIFQETRDEFRQFLSSSKHRDCLF
NNRSTIYDLLASHGNVDDMVYFSVVMQDYERVISHYCQHDNFSAALDVLAKHCDEKLFYK
FSPVLMQHIPKNVVNAWIQMGKRLDPKKLIPALMNYSQMGSAQQINETIRYMEFCVYELN
VTEEAIHNYLLSLYAKYKPDSLLQYLRQAGTHPSEIHYDLKYALRLCAEHGFLQACVLVY
RIMELHEEAVDLALQVDVDLAKSCADLPEDDEEMRKKLWLKIARHVVQEEKDVKKAMNCL
SSCNLLKIEDILPFFPDFVTIDHFKEAICSSLEEYNKHIEELKQEMEEATESAKRIREDI
QEMRNKYGVVDSQEKCAACDFPLLNRPFYLFLCGHMFHNDCLFQEVTPHLSAFKQNRLEE
LQKKLAATTQSSKSRHRPAQKEEGDTASLGKGVGATSREQIVSDIDDIVASECAYCGELM
IKSIDKPFIDPQKFEQDKASWL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcttctattcttgatgagtatgaggattctcaaaacatcaggcaaagttctcagcaa
cacagccgcctgagctctgctaacatcgggctaacacattcaggctttgtgaacgtcaga
ctggaggaagaaaagccaatattcaacaaacagaggattgactttactccacctgagagg
ataaatcacttgtcagtctgcaacaaccagctctgcatgagtctgggaaaagacacgttg
ttgaggattgacttggcaaaaccagatcaactcaatcaaaccgaattaggaaggaaagac
gacagcaaagtgtacaagctgttcctggacccgacaggctcccatctgctgatcagcctg
aacaccagcgagtgtctgtacctcaacaggaacacccagaaggtgcgcagtctgtcccgc
tggagaggtcacctcatcgagagcgtgggctggaacaagctgctgggcaacgagaccagc
acagggcccatcttggttggcaccagtcaggggatcatctttgaggcggagatctctgcg
aacgagggcagcctgttcaataccaacccggatcagtacttcagacaggttcactccctg
gaagaggacggcaggcctgcaccagtctgctgcttggaaatagagcgaagcccagaaaac
aagtacttcatcatcgccaccacccgcaagcgcctgttccagtttgtgggtaaagtggcc
gaagggtcggagcagcaaggtctcagcaccatcttcagtcagaaccaggacctgctgccc
agtttccaggagttcccagtcaacatgggatacagtgagattaccttctacacagcgaaa
cttaggaacttccccaaagcgtttgcctggatgatgggtaatggcgttctctatggccag
ctagactacatccggcctgattccctgctgagtgacgtccaggtatgggaatacacaccg
gatatcgacattagccagaacaaacccatatccattgtgctgacacagttccacttcctg
ctgctgcttcatgaccgaataaaggcaatctgcactctgaacggacaggtggtgtacgag
gacgtgttcccagataagtttggtccccttaagagaatgatcaaagatccgattggtggg
ttggtatggatctacacggagcgagcggtcttccgatatcacatccagcgcgagtctagg
gacgtctggcagatgtacatgagcatgaacaagtttgacctcgccaaggagtactgccgc
gaccgtcccgagtgcatggacatggtgctggctaaggaggccgagtactgctttcagaac
aggagatacctggaaagcgccaagtgctacgcactcactcagaactacttcgaagagata
gcgctcaagttcatcgaagcgaagcaagaagaagcgttgaaggagttcttgctgaagaaa
ctgaacaatctgaaacaaagcgagagaacgcagatcaccttgctggtcacctggctgacc
gagctctacctgaaccgactcgggcagctggagagcgacgacaacagcctcatcttccag
gaaacccgagatgagttccgccagtttctgagcagctccaagcacagggactgcctgttc
aacaaccgcagcaccatttacgacctgctggccagccacggcaacgtggacgacatggtt
tacttctcggtcgtcatgcaggactacgagagggtcatatcccactactgccagcacgac
aacttcagcgcggccctggacgtgctcgccaagcactgcgacgaaaagctcttctacaag
ttctcgccggtcctcatgcagcacattcccaagaacgtggtgaatgcgtggatccagatg
ggcaagaggctggacccgaagaagctcatcccggctctgatgaactacagccagatgggc
agcgcccagcagatcaacgagaccatccgctacatggagttctgtgtttacgagctgaat
gtcactgaggaagccattcataactacttgctgtcactttatgcaaagtacaagccagac
tctctgttgcagtatctcagacaggcgggtactcacccctcagagatccactacgacctg
aagtatgcactcaggctgtgtgcggagcatggctttcttcaggcctgtgtgctggtttat
agaataatggaactgcacgaggaggcagtggatctggctttacaagttgacgtggacttg
gccaagtcctgcgcagatctgcccgaggacgacgaggagatgaggaaaaagctttggctg
aagatcgccaggcatgtggtgcaggaggagaaggatgtgaagaaagccatgaactgtctg
tccagctgcaacctgctcaagatcgaagacatcttgcctttctttccagattttgtcacc
atcgaccactttaaggaggcaatctgcagctccctggaggagtacaacaagcacatcgag
gagctgaagcaggaaatggaggaagccacggagagtgctaaacgaatcagggaagacatc
caggaaatgaggaataagtacggcgttgtggactcccaagaaaagtgtgcagcatgtgac
ttcccgttactcaacaggcccttctatttgtttctgtgtggacacatgttccataacgac
tgcctgtttcaggaagtgacccctcacctctcagccttcaagcagaatcgcctggaagag
ctccagaagaaactggctgctacgacacagtcctctaaatctcgccaccgtcccgctcaa
aaggaggaaggggacacagcgagtctgggaaagggcgtcggggcaacgagccgtgagcag
atcgtatcggacatcgatgacatcgttgcgtctgagtgcgcgtattgtggcgaactgatg
atcaaatccatcgacaagcctttcattgatccgcagaaatttgaacaggacaaagccagc
tggctgtga
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integrated database retrieval system
