Poecilia reticulata (guppy): 103458215 Help Entry 103458215         CDS       T05149                                  Symbol vps39 Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism pret  Poecilia reticulata (guppy) Pathway pret04140   Autophagy - animal pret04148   Efferocytosis pret05132   Salmonella infection Brite KEGG Orthology (KO) [BR:pret00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     103458215 (vps39)    04148 Efferocytosis     103458215 (vps39)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     103458215 (vps39)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pret04131]     103458215 (vps39) Membrane trafficking [BR:pret04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     103458215 (vps39) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin TPR_Vps41 WD40_like Beta-prop_RIG_2nd Motif Other DBs NCBI-GeneID:  103458215 NCBI-ProteinID:  XP_008397088 UniProt:  A0A3P9NRZ4 LinkDB All DBs Position LG22:5540523..5559344 Genome browser AA seq 876 aa AA seqDB search MHDAYEPVNILEKLPLQIDCLAAWEDWLLVGTKPGHLLLYRIKKDAATNRFEVTLEKSNK NFSKKIQQLYVVSQYKILVSLLENNIHVHDLLTFQQITVVSKAKGATLFACDLQQMSSGE ESLRMCVAVKRKLQLYYWKDREFHELQGDLGVPDVPKSMAWCENSICVGFKRDYYLIRLD GRGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGVCTQKCALNWTDIPIAME HQPPYIIAVLPRYVEIRTLEPRLLVQNVELQRPRFIASAGPNIVYVASNHFVWRLVPVSI ASQIQQLLQDKQFELALQLAKMKDDSDGEKKQQIHHIQNLYAFNLFCQKKFDDSMQVFAK LGTDPTHVIGLYPDLLPSDYRKQLHYPNPLPSLSGAELEKAHLALIDYLTQKRSHLVKQL NDTXPSTTSPLMEGTPTIKSRKKLLQIIDTTLLKCYLHTNVALVSPLLRLENNHCHIEES EYVLKKSQKYSELIILYEKKGLHQKALQVLLDQSTKANSPLKGHERTVQYLQRLGSENLG IILEFSPWVLKICPEDGLKIFTEDLPEVETLPRDKVLQFLKEGFVELAVPYLEHIIYVWD EKGPEFHNVLIQLYLSRVQGLMKQYLNSLPEGVPAVPAGQEQGELGEFRNKLLSFLDIST SYEPARLISDFPFDGLLEERALLLGRMGKHEQALFIYVHVLNDTRMAEEYCHRHYNSSME GNKDVYLSLLRMYLSPPDAHCLGPIKMELTEPQANLQAALHVLELHHSKLNTTKAINLLP ANTQIREIKVFLESVLEEKAQMKRCNQVLKSLLQAEFLRVQEERIFHQQVKCVITEEKTC RVCKKKIGNSAFARYPNGVVVHYFCCKDRSVCPTEQ NT seq 2631 nt NT seq  +upstreamnt  +downstreamnt atgcatgacgcgtatgagccagtgaatattttagagaagcttcctcttcagatcgactgt cttgcggcttgggaggattggctgcttgttggaacaaaaccaggacatcttctcctgtac agaatcaagaaggatgcagccaccaaccggttcgaggtgactttggaaaagtctaataag aacttctcaaagaaaattcaacagctatacgtcgtttctcagtataaaattctcgtcagt cttttggagaacaacatccacgtccatgacctcctgacctttcagcagatcactgtggtg tctaaagccaaaggagccacgctgtttgcatgtgacctgcagcaaatgagctccggggag gaaagcctccgaatgtgtgtggcggtgaaaaggaaactccagctgtattactggaaggat agagagttccatgagctgcagggcgacttgggtgtgccagatgttcctaagtccatggcc tggtgtgaaaactccatctgtgtcggcttcaaacgggactattacctcattcggctggat ggccgcggctccatcaaggagctcttccccactgggaaacagttggagcctctagttgcc ccgctggctgatgggaaggtggctgttgggcaggacgacctcaccgtggtgcttaacgaa gaaggagtttgcacccagaagtgcgccctgaactggaccgatatccccatcgccatggag caccagcctccctacatcattgcggtcctccctcggtacgtggagatacggaccttagag ccacggctgctggtgcagaatgtggagctgcaaaggccgcgcttcatcgcctcggcaggg ccaaacatcgtgtacgttgccagcaaccacttcgtctggcgcctggtgccagtgtcaatc gccagccagatccagcaacttctccaggacaaacagttcgagctcgctcttcagctggca aaaatgaaggacgattcagacggtgaaaagaagcagcagattcatcacatccagaatctt tacgccttcaacctgttttgccagaagaagtttgacgactccatgcaggtgtttgctaaa cttggtacagatcccacgcatgtgatcggactttaccccgacctgctcccatcagactac cgcaaacagctgcattaccccaaccctctgcccagcttgtctggggccgagctggagaaa gctcatctggctctcattgattacctcacccagaaacgcagccatcttgtcaaacagctg aacgacaccrgcccgtccacaacgtctccgctcatggagggaacgccgaccatcaagagc cgcaaaaagctcctgcagatcatcgacaccacgctgctgaaatgttatctgcacaccaac gtggctctcgtctctccgctccttcgactggagaacaaccactgccacatcgaggagagc gagtacgtcctgaagaagtcccagaagtacagcgagctcatcattctctacgaaaagaag ggcttgcatcagaaagccttgcaggtcctgctggaccaatccaccaaggccaactctcct ctgaaaggtcacgagcgaaccgtccagtacctccaacgactgggatcagagaatctgggg ataatcttggagttttctccctgggtacttaaaatctgtcctgaggacggcctgaagatc ttcactgaagatctgcccgaggtggagactttgcccagagacaaagtgctgcagttcctg aaggaaggcttcgtggagctggccgtcccgtacttggagcacatcatttacgtgtgggac gagaagggccccgagtttcacaatgtgcttattcagctgtatctgagyagggtccaaggc ctgatgaagcagtacctcaactcactgccagaaggggttcctgccgttcctgccggccag gagcaaggtgaactgggagagttcaggaacaagctgctgtcttttctggatatttccacc agctatgaacctgccagactcatcagcgatttcccatttgatgggctgctggaggaacgg gctctgctcctgggtcgcatgggaaaacacgagcaggcgcttttcatatacgttcacgtt ctgaacgacacccgcatggccgaggaatactgtcaccggcattataacagttcaatggaa ggaaataaagatgtttatctgtctctgctgcggatgtacctgtccccccccgacgcccac tgcctggggcccattaagatggagctcactgagcctcaggccaacctgcaggcagccctg catgtcctggagctgcaccacagcaagctcaacaccaccaaggctatcaatctgctccca gcaaacactcagatccgggagataaaggtcttcctggagagcgtcctggaggagaaggcc caaatgaaacgctgcaaccaggtgttgaagagtctgctgcaggccgagttcctcagggtg caggaagaacgaatcttccaccagcaggttaaatgcgtcataacggaagaaaaaacctgc agagtctgtaagaagaagataggaaacagtgcgtttgccaggtatcccaacggcgtggtg gttcactatttctgctgcaaagatcgcagcgtgtgtcccaccgagcagtaa

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