Poecilia reticulata (guppy): 103458357
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Entry
103458357 CDS
T05149
Symbol
shprh
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pret04121
]
103458357 (shprh)
Enzymes [BR:
pret01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103458357 (shprh)
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103458357 (shprh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
zf-C3HC4
PHD
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
TPR_10
TPR_12
Motif
Other DBs
NCBI-GeneID:
103458357
NCBI-ProteinID:
XP_008397297
LinkDB
All DBs
Position
LG22:complement(9087385..9101760)
Genome browser
AA seq
1664 aa
AA seq
DB search
MSSRRKRAPPVRVDEESKRRLEWNMLEDRKNEAVQEAVQEDDQTPSSSSCLSVDLTACRS
FLSAVEDITEEDACALSVQLSDELPSTSSDSSSAASASLALSVVPALKLGHVWKALIGEF
SIRPAWLPSDYEHRSFLAYRTGKQLYLSYSSCDESPGPQWSPEEDGCAVECSLGRIPFED
LDWLQKRRVVQLCHQTKEQEVKLGIYLLETGLGKPEFLSEGNARPKKATQIMQKLMEYFY
DFIIPEVVENEEEECDTDLERQNVEELYDYVRHQHQEENQDATYDVQHKVLIPVLRPYQS
QAVNWMLKREKYNISAPKEHSLHFLWREVVTLCGKKLFYNPFTGCLIREFPLAGIEWPGG
ILADEMGLGKTVEVLALILFHTRQNLEQEALTLPVGKSVNYFVPPRPIEVKTTRCKPEAQ
LKIKTSHPAVRVMLLNAIKEMRTGKGASVNAVFTYIRATYGYDLLKNRNHIKKTLAKLIN
EGFVDRVKGRGLAGSFKLGKNYKETKKILSAASKLIFRPAESMPRKTFQRRAKEKAEAAL
QNSLSDSQRDLSHASDRRDTEGKEQKQWEGKANKKAYLEDSATSTGSAAVSLRLSLGKLE
SNTQEIPRADRGEEASGMDSQDETETPTRASVVPFNTTDYRFECICGELGIIDYKPRVQC
MNCQLWQHAECVNYKEESLTTTPFYCPHCLVAMKPVSTGATLIISPSSICHQWVEEINRH
IRSSSLRVLVYQGVKKHGFIQPRMLAEQDVVITTYDVLRSELNYVDIPHSNSKDGRRFRN
QKRYMAVPSPLVAVEWWRICLDEAQMVECPTAKAAEMALRLASINRWCVSGTPVQRGLED
LYGLTLFLGVDPYWVKYWWDQLLYRPYRRGNTEPLYNVIAQILWRSAKKDVIDQIQIPPQ
TEEVHWLHFSPVEGHFYHRQHEVCSQDALVKLRKISDWSLKLGSLDRRTVNTILYPLLRL
RQACCHPQAVRGEFLPLQKSTMTMEELLKSLQKKCRVECEEAHRQLVCALNGLAGIHIIR
GEFVEAAEMYREVLRSSEEHKGRLKTDSLQRLHATHNLMELLNAKHRGIPPTLRDDRLGE
EAEQLRQHYMTKYDSEVADAHQALQPVLQNIKELKRKVNLNSPWWLEVVQLSTSCSTDED
LVSRVKNELTSSYKQQANKLSMADKFRDACGLQFILTTQMQDLMKSQKTVRDAVKSLEGP
ASKEVIEEATICHLRPMRLPLNNCVFCKADELFTDYESKLFAHTVKGQTAIFEEMIEDEE
GLVDDRLPTTSRGLWAASETERTLKAILSFAKAKRMDPELVEEGNTFMELFENWKKEYKV
LHEYWMVLRNHVSAIDELGMATERLRVRLPDEPKPKLLHIIEPHEVEQNRVKLLNDQAVA
KSQLQKKLGQFLYLTNLEKSQDKSTGGLNPEPCPICARPLGQEWAVLTCGHCFCNECIAI
IVEQYSVGSRRRAIKCAICRQTTSHTEISYVFTTQSSSHDQDIPVKGSHSTKVEAVVRTL
KQIQMNNPGAKCLVFSMWQSVLDIIAKALLDNNLEFSQINGIHKFQENLSSFKYDEKINI
LLLPLHTGSNGLNIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKPTFVHRFLIKSTIE
ERMQAMLKTAEKSHTSTAMKHSEAAVLTVADLADLFTDDTEHLE
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtcgaaggaagagggcccctcctgtgagggtggatgaagaatcgaagaggagg
ctggaatggaacatgctggaggacaggaagaacgaagccgtccaggaagccgtccaggaa
gacgaccagactccgtcctcctcttcctgtctttcagttgaccttaccgcctgcagatct
tttctctctgccgtagaagacatcacagaggaggacgcatgcgctctttcggttcagctt
tcagatgaacttcccagcacgtcctcggacagcagcagcgccgcctccgcctctctggct
ctctctgtggtgccggctttaaagctgggccacgtctggaaggctcttatcggggagttc
agcatcaggccagcttggctgccgtctgactacgagcacagatcttttctggcgtaccgg
acaggcaagcagctctacctcagttacagcagctgtgatgagagcccgggaccacagtgg
agccctgaggaggacggctgtgccgtggagtgcagcctcggcaggatcccattcgaggac
ctcgactggctgcagaagaggagggtggtgcaactctgccaccagaccaaggagcaggaa
gtgaagttgggaatttacctgctggaaactgggctggggaagccagagttcctcagcgag
ggaaacgctcggccgaagaaagcgactcagataatgcagaagctgatggagtatttctac
gatttcatcattcctgaagtcgtagagaacgaggaggaggaatgcgacactgatctggag
aggcagaacgtggaggaactctacgactacgtgaggcaccagcaccaggaggagaaccag
gatgcaacatacgatgtccagcacaaggttctgattcccgtcctcaggccctaccagagc
caggccgtcaactggatgctgaagagagagaaatataacattagtgcacctaaagaacac
tccctgcatttcctgtggcgagaggttgtgactttatgtggcaagaagttgttctataat
ccctttaccggctgcttaattcgagaattcccgctggccggaatcgagtggcccggtggg
attctggccgatgagatgggcctcgggaaaacggtggaagttttggcacttattctcttc
catactcgtcagaatctggagcaggaggccctcacgttgcctgtgggaaaatctgtgaat
tactttgttcctcctcgtccgatagaagtgaaaactacacgctgcaagcctgaagcccag
ctgaaaataaaaacttcccacccagctgtgcgcgtgatgttgctaaatgcaataaaggag
atgcggaccggcaaaggagcctctgtcaacgctgtgttcacctacatccgggccacttac
ggctatgacctcctgaagaaccgcaatcacatcaagaagacgctcgcgaagctgataaac
gaaggatttgtcgaccgcgtaaagggccggggtctggcgggttctttcaagttggggaag
aactacaaagaaacaaagaaaatcttgtctgcagcatccaagttgatcttcagaccagcg
gagagcatgccaaggaagacgtttcagaggcgagcgaaggagaaggccgaggcggctctc
cagaactccctctcagacagtcagagagatctgagccatgcatcggaccggcgtgacaca
gaaggaaaagaacaaaagcaatgggagggaaaagcaaacaagaaagcctatctggaagac
agtgcgacgtcgacgggttctgccgcggtatctttacggctttctctgggtaaacttgag
tcaaacacacaggagattcccagagcagacagaggagaagaagcctctgggatggattca
caggatgagacggaaactcccaccagagcgtccgtagtcccgttcaacaccacagattac
cgctttgagtgtatctgtggagagctgggcattattgactacaagccgcgtgtgcagtgt
atgaactgtcagctgtggcagcacgcagaatgtgtgaactataaggaggagagcctcaca
accacgcccttctactgccctcactgcctggtggctatgaaaccagtatccactggtgcc
acgctcatcatttcgcccagctccatctgccaccagtgggtggaggagatcaaccgccac
atcagatcctcctctctgcgcgtgctggtgtatcagggcgtgaagaaacacgggttcatc
cagcctcggatgctcgctgagcaggatgtggtcatcaccacctacgacgttcttcgctct
gagctcaactacgtcgacatcccccacagcaacagcaaggacggccgacgcttccgcaac
cagaagcgctacatggcggtccccagccctctggtggccgtggagtggtggcgcatctgt
ctggatgaggcccagatggtcgagtgtcccactgccaaggctgcagaaatggctctgcgt
cttgcctccatcaaccgttggtgcgtcagtggcactcccgtccaacgaggcctcgaagat
ctgtacggcctgacgctttttctcggagtggatccatactgggtgaaatactggtgggac
cagctgctttatcgcccctatcgccgcggaaacacagaacctctgtacaatgtgattgct
cagatattgtggcggtcggctaaaaaggacgtcatcgatcagattcagattccccctcag
acagaggaggtgcactggcttcacttttctcctgttgagggccatttctaccatcgccag
cacgaggtctgctcccaggacgctctggtcaaactcaggaaaatctccgactggagcctg
aaactgggcagcctggaccgccgcaccgtcaacaccattctgtacccgctgctgaggctg
cgccaggcctgctgccacccgcaggccgtgaggggggagttcctgcctctgcagaaaagc
accatgacaatggaggagctcctcaagtccttgcagaagaaatgtcgagtggagtgtgaa
gaagctcacagacagctggtgtgcgcactcaacggcttggctggaattcacatcatccga
ggcgagtttgtggaggccgccgagatgtatagagaagttctgcgctcatcagaggagcac
aaaggccggctgaaaactgattcattacagcgacttcatgccactcacaacctaatggag
ctgctcaatgcaaagcatcgtgggattcctccaacactcagagatgaccgactcggtgaa
gaggctgagcagctgcggcagcattacatgaccaaatacgactcggaggtggccgacgct
catcaggctctgcagccggttctgcagaacatcaaagagctgaagcgcaaagtgaacttg
aactccccctggtggttggaagtcgtccagctgtcaaccagctgttccaccgatgaagat
ctggtgtctcgtgtgaagaatgagctaacttccagctacaagcagcaggccaacaaactc
tccatggcagacaagttccgtgacgcttgtggtctgcagttcattctcaccacacaaatg
caagatctaatgaagtcacaaaagactgtccgagacgcagtgaagagtcttgagggcccg
gcttctaaggaagttattgaagaggccaccatttgccaccttaggccaatgcgactgcca
ctcaataactgtgtgttttgtaaagccgacgagcttttcactgattatgaatccaagttg
tttgctcacacggtgaaaggccagactgccatcttcgaagagatgatcgaggacgaggaa
ggcctggtggacgaccgcctccccaccaccagtcgtggtctgtgggcggcgagcgagacg
gagcgcactctgaaagccatcctgtcgtttgccaaagctaagcgcatggacccggagctg
gtggaggagggcaacacgttcatggagctgtttgagaactggaagaaggagtataaggtg
ttgcatgagtactggatggtgctgcgcaatcatgtgtcggccattgacgagttgggcatg
gcgactgaacggctgcgggttcgtctgcctgacgagccgaagcccaaactgctgcacatt
atagaaccacatgaagtggagcagaacagggtgaagctcctgaacgaccaagctgtggcc
aagtctcaactccaaaagaagcttggacagtttctgtatctcaccaatctggaaaagtca
caggacaagtcaactggagggctgaacccagagccatgccccatctgtgctcgtcctctg
gggcaggagtgggccgtgttgacttgcggccactgcttctgtaacgagtgcattgccatc
atcgtggagcagtacagcgtgggctcaaggcggagagccatcaagtgtgccatttgcaga
cagaccacttcccacacagaaatctcctacgtgttcactacccagtcatccagccacgac
caggacataccagtcaaggggagccactctaccaaagtggaggcagttgtgagaacacta
aagcagatccagatgaacaatcccggagccaaatgtctcgtcttttcaatgtggcagagt
gtcctggacatcatcgccaaggccttgttggacaataaccttgagttttcacaaatcaat
ggaattcataagttccaggagaatcttagttctttcaaatacgatgaaaagatcaatatt
ctcctcctcccactccacactggctccaatgggctgaatatcatcgaagcaacacacgtg
ttgctggtagaaccaatcctcaacccagctcacgaactccaggctatagggagggtgcac
cggattggccaaacaaagccgacatttgtacacagattcctgatcaaatccactattgag
gagcgaatgcaagcgatgctaaagacggcagaaaagagtcacaccagcacagccatgaag
cattcggaggctgctgttctgacggtggctgacctggccgatctgtttacagacgacacc
gaacatctggagtga
DBGET
integrated database retrieval system
