Poecilia reticulata (guppy): 103458405
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Entry
103458405 CDS
T05149
Symbol
ptbp1
Name
(RefSeq) polypyrimidine tract-binding protein 1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103458405 (ptbp1)
03041 Spliceosome [BR:
pret03041
]
103458405 (ptbp1)
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
103458405 (ptbp1)
Spliceosome [BR:
pret03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103458405 (ptbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
103458405
NCBI-ProteinID:
XP_008397395
UniProt:
A0A3P9PB40
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All DBs
Position
LG22:7704073..7719869
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AA seq
577 aa
AA seq
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MDGRLDATELYPLGSGYVPEIDSVHDISVGTKRGSDELFSSCISNGPYIMNSANGNDSKK
FKGDVRSPGVPSRVVHVRKLPNDINEAEVISLGLPFGKVTNLLMLKGKNQAFLELNSEEC
AQTMVSYYSSVTPVIRNHPIYMQYSTHKELKTDNSPNQVRAQAALQAVNALHGGGMGSMA
IPTDASSLAGATAQSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALI
QYADAMTAQHAKLSLDGQNIYNACCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTADSQ
PSLDQQAMAAAAFTAPGIISASPFGGAHAFPPAFAIQQAGLSVPGIPGALASLGVGHTSM
AAAAAAAASRLGLSGLTATGGHNVLLVSNLNPETVTPHCLFILFGVYGDVMRVKILFNKK
ENALVQMSDGTQAQLAMSHLNGQRLHGRAMRVTLSKHTTVQLPREGHEDQGLTKDFSNSP
LHRFKKPGSKNYSNIFPPSATLHLSNIPPSVMEDDLKRLFASSGATVKAFKFFQKDRKMA
LIQMGSVEEAIECLIEFHNHDLGENHHLRVSFSKSTI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggacggccgcctagacgccactgagttgtaccctctgggatccggctacgtccctgaa
attgacagtgtccatgacatatcagttggcacaaagaggggatccgacgaactcttttct
tcctgcatatccaacggaccctatatcatgaactcagccaatggcaacgacagcaaaaaa
ttcaaaggtgatgtccgcagtcctggtgtcccgtcacgtgtggtccacgtacgcaagctg
cccaatgacatcaacgaggccgaggttataagcctgggactgccctttgggaaggtcact
aatttgctgatgttgaaagggaaaaaccaggcctttctggagcttaacagtgaagagtgc
gcacagacgatggtgagctactactcttctgtcacccccgtcatcagaaaccaccccatc
tacatgcagtactcgactcataaggagctcaagacggacaactctcccaaccaagtgcgt
gcccaggcagctctgcaggcagtcaatgccctgcatggtggtggaatgggaagcatggcc
atccccacagatgcaagcagcctggctggagccacagcccagagccctgtgctcagagtg
attgtggaaaaccttttctaccccgtcaccctggatgttctgcatcagattttctcaaag
tttggaaccgtgctgaagatcatcactttcactaagaataaccagttccaggcgttgatc
cagtatgctgacgccatgacagctcagcatgctaaactgtctctagatggccagaacatc
tacaatgcttgctgtaccctgagaatcagcttctccaagctcactagcctcaacgttaag
tacaacaacgacaaaagcagggactacacccgccctgaccttcctacagcagattcccag
ccctcacttgaccaacaggccatggcagctgctgcatttactgctccaggtataatctca
gcctcgccgtttggtggagcgcatgccttccccccagcatttgccatccagcaagctggt
ctgtcagttcctgggattcccggtgccttggcgtccctgggcgtgggtcacaccagcatg
gcggctgctgcggcagccgcagccagccggcttggcctatcagggctcactgccactggg
ggacacaacgtgttgctggtcagcaacctgaaccctgagaccgttacgccacactgcctc
tttattcttttcggtgtgtacggtgatgtcatgagagtgaagatcttgtttaataaaaag
gagaacgctctagtccagatgtctgatggcacacaggctcagctagccatgagccacctg
aatggccagcgtctccatggcagggccatgcgcgtgacgttgtcgaagcacacaacagtt
cagctgcccagagaaggccatgaggaccagggcctcacaaaggatttcagcaactcgccg
cttcaccgcttcaagaagcctggctccaaaaattactccaacatcttcccaccgtctgca
acactccacctctccaacataccgccttctgtgatggaggatgatctcaaaagactcttt
gcaagctcaggagccacagtcaaggcctttaagttctttcaaaaggaccgcaagatggcc
ctgatccagatgggctcagtcgaagaggcgatcgagtgcctcatcgagttccacaaccat
gatctgggagagaaccatcacctccgagtgtccttctcaaaatccaccatctga
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