Poecilia reticulata (guppy): 103458526
Help
Entry
103458526 CDS
T05149
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04145
Phagosome
pret04814
Motor proteins
pret05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103458526
09142 Cell motility
04814 Motor proteins
103458526
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103458526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pret03036
]
103458526
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pret04812
]
103458526
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
103458526
Cytoskeleton proteins [BR:
pret04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
103458526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_Prp19
Beta-prop_EML
Dynein_IC2
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
103458526
NCBI-ProteinID:
XP_008397639
LinkDB
All DBs
Position
LG2:30374148..30398938
Genome browser
AA seq
638 aa
AA seq
DB search
MSDKSELKAELERKKLRLAQIREEKRRKEEERKKADQQQKEASQQQDDSDLEKKRREADA
LLESMGITPDAALAPPLTTPAPKSAETPSETGSQDSDGAVGPRTLHWDSDPSTLQLHSDS
ELGYWTLSSLLSWRVTPKLGMAKVTQVDFPPRETVSYTKETQTPAPIQAKEEEEEEEEIA
PAQPVVEDQTEKLVQKEEEEEEAPPYELTEEEKLQVLHSEEFAKFFDQSTRIIERALYEH
VDIFFDYSGRDLEDKEGEIQAGAKLSLNRQFMDERWSKHRVVTCLDWSLQYPELLVASYN
NNEETPHEPDGVALVWNMKYKKATPEYVFHCQSAVMSAAFAKFHPNVVVGGTYSGQIVLW
DNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSQPQD
SMELVFKQSKAVAVTSMSFPLGDVNNFVVGSEDGSVYMSCRHGSKAGISEMFEGHHGPVT
GIHCHTAAGPLDFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDVMWSPTHPALF
ACVDGVGHLDLWNLNNDTEVPTASVVVEGSPALNRVRWAHTGREIAVGDADGCILVYEVG
EQIAVPRNDEWTRFVCTLAEINENRDDAEELAAQNLAA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagtgagctgaaagcagaactagaaaggaagaagctgcgtttggcacaa
atccgggaggagaaaagaaggaaggaggaggagcgaaagaaggcggaccaacagcagaaa
gaagcttcacaacagcaggatgactccgacctggagaaaaaaagacgagaagctgacgct
cttctggaaagcatggggataacaccagatgctgcacttgcccctcctctcacgactcct
gctcccaaatcagcggaaactcctagtgaaaccggcagccaggactctgatggagccgtg
ggacccaggactctgcactgggactctgacccgtccactcttcaacttcactctgattct
gagctggggtactggacactctcttctctcctttcctggcgtgtgactccaaaactggga
atggccaaagtcacgcaggtggacttcccaccacgtgagacagtgtcctacaccaaggag
actcagacaccagcccccatccaggctaaagaagaagaagaagaggaggaagaaattgct
ccagctcaaccagtagtcgaggatcaaactgagaaactggtccagaaagaagaagaagaa
gaagaagccccgccgtacgagctgaccgaggaggaaaaactccaggtcctccactccgag
gagtttgctaaatttttcgaccagagcactcgcatcatcgagcgagcgctctacgagcac
gtggacatcttctttgactacagcggtcgtgacctggaggacaaggaaggggaaattcag
gcgggagcgaagctttcactgaacaggcagttcatggacgagcgctggtccaagcatcgg
gtcgtcacctgtctggactggtctctgcagtatcctgagctcctggtcgcctcctacaac
aacaacgaggagactccacatgaaccagacggcgtggctttagtctggaacatgaagtac
aagaaagccacgccagaatacgtcttccactgtcagtcggccgtgatgtctgcggcgttt
gcaaagtttcacccgaacgtcgtggttggagggacgtactctgggcagatcgttctgtgg
gacaacaggagcaataagaggacccccgtgcagaggaccccgctctcggcggcagcgcac
acgcacccggtgtattgtgtgaacgtagtcggcacgcagaacgcccacaacctgattagc
atctcaaccgacggcaagatctgctcctggagtctggatatgctctcccagccgcaggac
agcatggagctcgtcttcaagcagtccaaagctgtcgccgtcacctccatgtccttccct
ctcggagacgtcaacaactttgtagtgggcagcgaggacggctccgtctacatgtcgtgt
cgtcatggaagcaaagcggggatcagcgagatgttcgagggccaccacggccccgtcacc
gggatccactgccacacagctgcagggccgctggacttctcccacctgtttgtcacctca
tccttcgactggaccgtcaaactgtggagcaccaagaataacaagccgctctactcgttt
gaagacaactccgactacgtgtatgacgtcatgtggtctcccactcacccggctctgttt
gcatgcgtggacggcgtcggccacctggacctgtggaacctgaacaacgacaccgaggtc
cccactgctagcgttgtggtggaggggagcccggccctcaacagggtcagatgggctcat
accgggagagagatcgcagtgggagacgccgatggatgcattcttgtttatgaggttgga
gagcaaattgcggttccgcgaaacgacgagtggacgcgcttcgtctgcacgctggcagag
atcaacgagaacagagacgacgcggaggagctggccgctcagaatctggctgcgtga
DBGET
integrated database retrieval system
