Poecilia reticulata (guppy): 103458589
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Entry
103458589 CDS
T05149
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103458589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pret03000
]
103458589
03021 Transcription machinery [BR:
pret03021
]
103458589
03036 Chromosome and associated proteins [BR:
pret03036
]
103458589
Transcription factors [BR:
pret03000
]
Eukaryotic type
Helix-turn-helix
ARID
103458589
Transcription machinery [BR:
pret03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103458589
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103458589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
103458589
NCBI-ProteinID:
XP_008397727
LinkDB
All DBs
Position
LG22:complement(12256219..12455516)
Genome browser
AA seq
2221 aa
AA seq
DB search
MAAQVASAPTRTNNKNKKLSGTLAPELNSGKSGGGGGGAGTAQRSGQMLGAGDGTLNNVD
HHRRGELGSMVHSTSAAHKAPDGHDKTGINLSASNSNTSPMEAALIANHKLKCAGSGDAP
QPQQQQPPPPQFGQFAPHQQRQSNNSNNGQPARGDRSVDHQQHGGKENLLVGQEESQQQH
GPGKGEGDLTCKPTERMMGSRFEHSNLGPPTNNSEFNNSYYTSRPCYDQHGGQQQQSSGM
GVTQDSNEGGYHNSQYGQYPAYRAGYGGGAYGMIGSSGCRQPGNMMMGSNSSATHGKSPV
SGGFQRYAGQTQQQQGPSGATPTLNQLLTSPSPMMRGYGGAYQDYGGPTPQQQAGMALGK
DVGSQYGASTGHWGGQQRNHPLSMNAGSGGQGLGRTQVPSMDFMAMKRSQMYGMTNNPYS
TPQQPGAGSYPSSQPYASPPSHRYPMSMQGRGQMSMSGMQYPQQQQVAPYGQQSMGGFSR
EQQGGQQGTPPYFSPPQQTPTGPSQSSYLQPRPPPQQEAQQENYSMRGPGPGNSGKTSNE
VGVAQDRPSSLPDLSGSIDDLPTGTEAGLGSAAGAGGSSNGSSSGSSQGEPGGAGNQGQS
PFSPHASPHLPGQRSGPSPSPVGSPAGSTQSQPSRSGSGPISPASGPPANTTAPGSAVAP
LSSGNGPDAAHLPITRSPVAQERGFMSNMQRNQSGSQFAPPQSGPPMSPHSSHGGSMYPS
MGPYSQSGPAGPYGPQGPQYGHQGNYPRPSNYIGSAGSNYSGPSLSNSLGMNATSPMHGQ
GPGGRSHGPGSQNRTYPIMGPTSPSMPQPAGPGMGPPSNRKPQEGAVANSVHNRQGNYQA
PGINQVSSGSYSQSTSNNSSTMGNGQGPGYGMPPAGAVGLSGDSIMSPESKQKMDVKDDS
GPNNEPHKPKLQDGYVNNNSSSVSQPATPGGTLPVPSPLSPSPASLSSYHGDDSDSISSP
PWPLKTPCSPQKVNPNSSSIGGERISRLYELGSEPERRSWVERYLTFMEERGTPVSQLPV
VGKKPLDLWKLYVAVREIGGLAMVNKNKKWRELSGTLNVGTSSSSASTLKKQYIQHLFAY
ECKMERGEEPPTDSNSGGSLTEGDSRKQVKIQPPSPANSGGSLQGPQTPQSSGSSSTAEA
AGDLKPPTPATTPLGQVTPLPPNRSSVSVQDPFSEVSDPAFQKRTSSLPPSAPYQQALGM
PDMMMRMQYDAKDPFAGMRKMAGADPYIPSQMSSGGMQDLYSRPPSGLSMSQRSQYPYGP
GYDRRPDHMMGMEGTMGPPGSQNNMGHSNSEGNMYSPSRYSSQQRHDGYGQQYPSMPYGM
HPSGMYPQQQGYKRQLDGMYGPPPKRHESDMYAMQYTNQQPDVYNHYSGGYSGPEHRPIQ
GQFPYPYHRDRMAPSGQSQHSMMGGGPASNHAPEGPNMWPSRTDLSYSYHSRQGPPSQMQ
PYGSICRDDIDGRSAHDHWHRQPPYISSSGGMAPMSSRHSSYSNSPTMANHLPRAPSPGA
FQRSMESRMSPSKAPFMSPMKMPKPGMVMMGSQGSGPNGQFPPNLRRDLNYPPGSVEATM
PALKPRRKLTSKDCGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVASFNLSQLP
GFLELVVEYFRRCLIEIFGILEEFEVRTMIPKSNLDCDSTQKENATLEKETDSANLSGSE
LSSATEMQERQTGVIKEEMSPVTEEQAEVPEKKQDPDMTKKKENSNKGQVEKGLKEVEEK
ETKKGCVDEPPAETESKPKQASKYDKLPIKIVHKDDLIEDITERLGYVTEFDSGLLHWQA
GGGDSTAHIQTHFELRSDPPARRGNKTLNENKPENKMEGEDSKTLKHVTATIDDVLCARV
DALSYAHPARSLPSYPFRVHPDGEDDHITLLEDEPRCLDEAPLCTTSSWQDSLSKRCLCV
SNIVRSLSFIPGNDSEMSHHPALVLLLGRLLLLHHVHPERNRSAPTYQRDEQQERGLSSS
KEEWWWECLSLLRENAMVTLSNIAGHLDLSTYSDTICLPILDGLLHWMVCPSAEAQDPFP
STSPHSQLTPQRLVLECLCKLSIQDGNVDLLLATPPFSRQEKLFAVLVRYVGQRKAQVYR
EMAVAVLSHLAQGDPTAARAIALQKASVGNLVTFLEDGVSMAQYQQHPHNLLHIGHPPMD
PPSVNMMCRAAKGLLAMAKVEENKKEFVLYESRLLDISISSMLNTGVVAIVCQVLFHLGK
L
NT seq
6666 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaagtggcatcggctccgaccagaactaataataaaaataagaaattatcc
ggcactttggctccggagctcaattcggggaaatccggaggaggaggtggaggagcaggg
accgcgcagcggagcggacagatgctgggtgccggcgatggaactctgaataatgtagac
catcaccgccgaggcgagctcggcagcatggtccattcaacttccgcggcgcacaaagct
ccggacggccacgacaagaccgggattaacctctcggcgtcaaactcaaacacttccccg
atggaagcggctctgatcgcgaaccacaagctgaaatgtgcggggagcggagatgcgcct
caacctcaacagcagcagccgccgccgccgcagttcggccagtttgcgccacatcagcag
cgacaaagtaacaacagcaacaacgggcagcccgcccggggggacagaagtgtggaccac
cagcagcacggtggtaaggagaacctgttggtggggcaggaggagtcccagcagcagcac
ggcccggggaaaggtgagggggacctcacctgtaaacccacggagaggatgatgggctcc
aggtttgaacactccaacttgggtccccctactaacaactctgagtttaataacagctat
tacacttcaaggccgtgttacgatcagcatggcgggcagcaacaacaaagcagtggaatg
ggggtaactcaggactccaatgaaggggggtaccacaacagccagtacggccagtaccca
gcgtaccgggcgggctacggcggaggggcctacgggatgattggctcctccggatgcagg
cagcctggcaacatgatgatgggcagcaactcctctgcgacccacggcaagtcccctgtt
tcgggtgggtttcagaggtacgcggggcaaacacagcagcaacaggggccctcaggggcc
acgccaaccctcaatcaactgctcacgtcccccagcccgatgatgcggggttacggaggt
gcttatcaggactacggcggcccgacgcctcagcagcaggcgggcatggctttggggaaa
gacgtgggctcccaatatggagccagcactggccattggggagggcagcagaggaaccac
ccgctttcaatgaatgcaggcagcggagggcagggcctcggcagaacacaggttccctcc
atggatttcatggctatgaagcgctcacagatgtatggaatgaccaacaatccgtactcc
actcctcaacagccaggcgccggaagttacccctcaagccaaccatacgcatcaccgcct
tcacatcgatatccaatgagcatgcaggggaggggccaaatgagcatgagtggcatgcaa
taccctcaacagcagcaggttgcaccatatggccagcagtcgatgggagggttcagcaga
gagcagcaaggcgggcagcagggaacccctccgtacttcagtcctcctcagcagactccc
acaggcccgtcccagagttcctacctgcagcctcgaccacctccgcagcaggaggctcag
caggaaaactacagcatgagaggacctggtccggggaattctgggaagaccagcaacgag
gtcggagtcgcccaggaccgtccttccagtctgccggatctctctggctcgattgatgac
ctccccactgggacggaggccggcctgggctcggctgccggcgctggcggatcctccaac
ggcagcagcagcggcagcagccaaggggagccgggaggcgccggtaaccagggacaatcc
cccttttccccccacgcctccccccacctccctggccagaggagtgggccctctccctct
ccggtggggtccccagcaggctccactcagtcccagccgtcccgttcaggctcaggacca
atttctcctgccagtggaccccctgccaacaccacagctccaggttcagctgtggccccg
ttgagctctggaaatggacccgatgcagcccatctgccaatcacacgctcccctgtggct
caggagagaggttttatgtccaacatgcagagaaaccagtctggctcgcagttcgcacct
ccccagtccggacctcccatgtcacctcactcatcccacggaggctcaatgtatcccagc
atgggtccatattcacagagtggccctgcaggtccctatggacctcaaggaccccaatat
ggacaccaaggtaactaccctcggccctctaactacattgggtcagctggaagcaactac
agcggccccagcctgtccaacagtctggggatgaatgctactagccccatgcatggacaa
ggacccggaggacggagccacggcccggggagccagaacaggacctacccaataatgggt
cccacctctcccagcatgccgcaaccagctggaccagggatgggtcctccatctaatcgc
aagcctcaggagggagctgtagccaactcggtgcacaacaggcagggaaactaccaagcc
cctggtatcaaccaagtgagctctggctcctacagtcagtcaacgagcaacaacagttcg
acgatgggcaacggacaaggaccaggctacggtatgccacctgcaggagcagtgggcctc
tcaggagacagcataatgagcccagaaagtaaacagaaaatggatgtcaaagacgacagc
ggcccaaacaacgagccacacaaaccaaagctgcaggatggttacgtgaacaataacagc
agcagtgtttcccagccagccactccaggcggtaccctgcctgtgccctcccccctctct
cccagtcctgccagcctgtcttcctaccatggagacgacagcgacagcatcagtagccca
ccgtggcctctgaagaccccctgcagtccccagaaggtcaaccccaactcgtcctccatt
ggtggcgagcggataagccggctgtatgaactcggttcagagccagagaggagatcttgg
gtggaacgctacctgaccttcatggaggagcggggtacacctgtttctcagctcccagtt
gtgggcaagaagccacttgatctctggaagctctatgttgctgttcgggaaataggaggc
ctcgccatggttaacaagaacaagaagtggcgcgagctgtccggcactctgaatgttggt
acgtccagcagctccgccagcacgctcaagaagcagtacatccagcatctgtttgcctac
gagtgtaagatggaaagaggagaggagccaccaacagacagcaatagcggcggcagcttg
actgaaggggacagcaggaagcaggtcaagatccagccgccctcacctgccaactcaggt
ggctcactccaaggtccacaaacgccccagtcatccggcagcagctctacagcagaggca
gcaggcgacctgaaaccacccacacctgccaccaccccgctgggacaagtcactccactg
ccccccaacaggagcagtgtaagcgtacaggaccccttctcggaggtgagcgacccggcc
tttcagaagcggacgagcagcctgcccccctcagctccataccagcaggccctcggcatg
cctgacatgatgatgaggatgcagtacgacgccaaggaccccttcgcggggatgaggaag
atggcaggagctgatccatatataccaagccagatgtccagtggtggtatgcaggacttg
tacagccggcctccatcaggtctgagcatgagccagcggtcccagtatccctatgggccg
ggctatgaccggagacctgaccatatgatggggatggagggaaccatgggtccgcctgga
agtcagaataacatgggacactctaatagtgaaggcaacatgtattctcctagcagatac
tcctcacagcagagacatgacggttatggtcagcagtatcccagcatgccgtatggcatg
catccatctgggatgtacccacagcaacagggctacaaacgacagttggatggaatgtat
ggtcccccacccaaaagacacgagagtgacatgtacgctatgcagtacaccaaccagcag
ccggatgtgtacaatcactacagtggtgggtactcaggccctgaacacagacccatccaa
ggacagttcccttacccgtaccatcgtgaccgaatggccccatcgggccagagccagcac
agtatgatgggtgggggccctgcttctaaccatgctcctgagggacccaacatgtggcct
tcaagaacagacctcagctattcctaccacagcagacaggggccaccatcgcaaatgcag
ccgtatggctctatttgtagagatgacattgacggtcgctccgcgcatgaccattggcac
cgtcagcctccctacatatcatcatcaggtggcatggcccccatgtcttcacgtcactca
tcttattccaattctccaaccatggccaaccatctgcctcgagcgcccagcccaggggcc
ttccagcgttcaatggaatctcgaatgtcacccagtaaagcccctttcatgtctcccatg
aagatgcctaagccagggatggtcatgatgggctcacaaggcagcggaccaaatggtcag
tttcctcctaacctgagaagggacctgaactaccctccagggtcagtcgaagccacaatg
ccagctctaaagccaagacgcaagctaacatcaaaggactgtggaacacctgaagcctgg
cgcgtaatgatgtctctcaagtctggcctgctggcagaaagcacttgggcattagacacc
attaacatcctgctatatgatgacagcacagtggcttccttcaacctttcccagttgcca
ggattccttgagctagttgtggagtactttcgccgctgcctgattgagatttttggaatc
ttggaagaatttgaggttcggacaatgattcccaaaagcaacctagattgtgattctacc
cagaaagagaatgctacccttgagaaggaaactgactctgcaaacctatcaggatccgaa
ttatcctcagcaacagaaatgcaggagaggcaaacaggagttatcaaggaggaaatgtca
cctgtcactgaagagcaggctgaggtgccggaaaaaaagcaggatcctgatatgaccaag
aaaaaggaaaacagtaataaaggacaagtggaaaaaggactgaaagaagtggaagaaaaa
gaaactaaaaaaggttgtgtggatgagcctcctgcagaaacagaatctaagcctaaacag
gccagtaaatatgataaactccccattaagattgtgcacaaagatgacctgattgaagac
ataactgagcgcttgggttatgtcactgagtttgacagtgggctgctacactggcaggca
ggtggaggtgattccactgcacacattcagacgcactttgaactgcggagtgatccgcca
gccaggaggggtaacaaaacattgaatgagaacaaaccggaaaataagatggaaggggaa
gatagcaaaacactgaaacacgttaccgccactattgatgacgttctgtgcgccagggtt
gatgccctgtcgtacgcccatcctgctcgatctttgccatcttaccccttcagggtgcat
ccagacggggaggatgaccacattacccttctggaggacgagccccgctgcctggatgag
gctccgctctgcacaacctcctcctggcaggactcactctccaagaggtgcctttgtgtt
tccaacatcgtgcgaagtctgtcctttatccctgggaatgacagtgaaatgtctcaccat
cctgcgctcgttcttcttttgggccggctgcttttgttacaccatgttcacccagagaga
aacaggtcagcaccgacctaccagagggacgaacaacaggagcggggactgtcaagtagc
aaagaggagtggtggtgggagtgcctgagtttgctcagggagaatgccatggtcacgctt
tccaacattgcaggacaccttgatctctcaacctattcagacaccatctgcctcccaatc
ctggacggccttctacactggatggtttgtccttcagctgaagcgcaagacccctttccg
tcaacatccccacactcccaactcactccccagaggctggtgctggagtgcctctgtaag
ctcagcatccaagatggcaatgtggacctcctgctagccacgccacctttcagcagacag
gaaaaattatttgcagtcctggtgcgatatgttggtcagaggaaggcacaggtgtacaga
gaaatggcggttgctgttctctcacacctggcacagggagaccccaccgcagcgcgtgcc
atcgccttgcagaaggctagcgtgggtaacctggtaaccttcttggaggacggcgtcagt
atggcgcagtatcaacagcaccctcacaatttgctgcacataggacaccctccaatggac
cctcccagtgtaaacatgatgtgccgagcagctaaaggactgttggccatggctaaagtg
gaggagaacaagaaagagtttgtactgtatgaaagcagattattagacatctccatttcc
tcaatgctcaatacgggggtggttgccatcgtttgccaagttctctttcacttagggaaa
ttatga
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integrated database retrieval system
