Poecilia reticulata (guppy): 103458631
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Entry
103458631 CDS
T05149
Name
(RefSeq) probable histone deacetylase 1-B
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03082
ATP-dependent chromatin remodeling
pret03083
Polycomb repressive complex
pret04110
Cell cycle
pret04330
Notch signaling pathway
pret04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103458631
03083 Polycomb repressive complex
103458631
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
103458631
04350 TGF-beta signaling pathway
103458631
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
103458631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pret03036
]
103458631
Enzymes [BR:
pret01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
103458631
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
103458631
HDAC complexes
Sin3A-HDAC complex
103458631
BRAF-HDAC complex
103458631
REST complex
103458631
SHIP complex
103458631
MiDAC complex
103458631
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
103458631
Heterochromatin formation proteins
Other heterochromatin formation proteins
103458631
Chromatin remodeling factors
NuRD complex
103458631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
103458631
NCBI-ProteinID:
XP_008397809
UniProt:
A0A3P9MYI0
LinkDB
All DBs
Position
LG22:complement(13803656..13808285)
Genome browser
AA seq
488 aa
AA seq
DB search
MAFTSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
SGEEMTKYHSDDYIRFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVA
GAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
IFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYIKSFNLPLLMLG
GGGYTIRNVARCWTFETAVALDSSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYL
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEDDPNKRISIRAHDKRIACEEEF
SDSEDEGEGGRRNAASYKKAKRTKTEGEKETEEKKKSTEEPKEVKEEEKVPEEEKMDTSK
PNEEPKTP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcatttacctcgcaaggcacaaagaaaaaagtttgctactactatgatggtgatgtt
ggaaattactactatggtcagggccatcccatgaagcctcaccgaatccgcatgacccac
aacctgctgctcaactatgggctctacagaaagatggagatctatcgtccacacaaagcc
agcggagaagagatgactaagtatcacagtgatgactacatccggttcttgcgctccatc
aggccggacaacatgtcagaatacagcaaacagatgcagagattcaatgtgggtgaggac
tgtccggtcttcgatggcttgttcgagttctgccagctctcagcagggggctccgtcgcc
ggtgccgtgaagttgaacaaacagcagacagacatcgcgatcaactgggccggagggctt
catcacgccaaaaagtccgaagcctctgggttttgctacgtcaacgacatcgtactggct
atcctggagttactgaaataccatcagagagttctgtatatagatattgacatccaccac
ggagacggtgtggaggaggctttctacaccacagatcgtgtcatgactgtgtccttccac
aagtatggggagtacttccctggcaccggtgacctcagggatattggtgctggaaagggt
aaatattatgctgtaaattatccactgagagatgggattgatgatgagtcctatgaagcc
attttcaaacctatcatggcgaaggtgatggagatgtaccagcccagtgctgtggtcctc
cagtgtggagcggactctctgtcaggggacagactgggctgcttcaacctcaccattaaa
ggccatgccaagtgtgtggagtacattaagagcttcaacctgccgctgctgatgctggga
ggaggcggctatacgatccggaacgtggctcgttgctggacgtttgagactgctgtggcc
ctcgacagctccatccccaatgagctcccatacaatgactacttcgagtactttggacca
gacttcaagttgcacatcagcccctccaacatgaccaatcagaacacaaacgactacctg
gagaagatcaagcagcgcttgtttgagaacctgcgcatgttgcctcacgccccgggagtc
cagatgcaagccatccctgaggacgccgtgcaggaggacagcggcgacgaagaggatgat
ccaaacaaacgcatatctatccgtgctcacgacaaaaggatagcgtgcgaggaagagttc
tctgactcggaggatgaaggcgaaggaggtcgcaggaatgcagccagctacaagaaagcc
aaaaggaccaagaccgaaggagagaaggagacggaggagaagaagaaaagtacagaggaa
ccaaaagaagtaaaagaagaagagaaggtaccagaggaggaaaaaatggacacatcaaag
ccaaatgaagaacccaagacaccttga
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