Poecilia reticulata (guppy): 103458638
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Entry
103458638 CDS
T05149
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03013
Nucleocytoplasmic transport
pret03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103458638 (srrm1)
03015 mRNA surveillance pathway
103458638 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103458638 (srrm1)
03041 Spliceosome [BR:
pret03041
]
103458638 (srrm1)
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103458638 (srrm1)
Spliceosome [BR:
pret03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
103458638 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
103458638
NCBI-ProteinID:
XP_008397815
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All DBs
Position
LG22:13849392..13861880
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AA seq
867 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKHPDSKMMQINLTGFLNGKNAREFMRDLWPLLLSAQENIAGIP
SAFLEQKKEEIRQRQIEQEKLASLKKVDQDKKDKDTRERTRSKSPRRWKMRSPGKRERKR
SPSRSPVRKPSPVVGDSPPPPLMQSNTKMSQQQPEEPDTSGTGLPETVIQEASSTGLIDT
VVESVKADSVTEVKEPTPEKSLKKEERPRSREREKETRRERPHHRSRSRSHSRSRRRRSR
SRSYSPRRRQSPRRRMSPRRRSPPRRGPTGSRHRHRRSPVRRRRSRSASSSGSSSSGSRS
PKKPVKRISTTPPRKQLHRPDASVSPVGKDKRSPSPRARRGRGSASPPRSSGVKRKPGGR
GDSPSDFVKARTSEGSESEEDKNEKGATADSVQQRRQYRRQNQQSSSDSGSSSSEDEGPK
RSAAGPGARNGEVRRKRSRTPSPRRRHRDPSPRRRRSPSPGRRRRSPSPPRRRRSPSPPR
RRSPSPPPRRRSLSPRRYSPPIQRRYSPSPLPPQKRKLSSSPTKRFSPGPKRRSSRSPKR
RSSPAQRRRSPPSSSSPPRHRRSPLSARPNRDTRSPVMSARRLSPSPANRGRPVRRSTSP
QRRFDSSSTSPSAQRRQQSPPHSSKLIRRVSRTPELRNKRISPSPKPIRRASSRSRSLSP
QPAAQKRPAPALALAPASASPSPSRSASGSPPPPPLAKKATSGSGSQSPSKNSDVDGGGK
KKKKKKEKKHKKDKKHKKHKKHKKEKSSAAATGDVQESRPAEEDGDGDSRKESESEVDDA
LDDLEKHLREKALRSMRKAQMSPSEMS
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggatttttccgcggcacgagtgcggagcaagacaaccgtttcagcaacaag
cagaaaaaattgctgaagcagctgaaatttgcagaatgtctcgacaagaaggtggacatg
accaaagtgaacctagaagtcatcaaaccatggatcactcaacgtgtgactgagattctg
ggatttgaggatgatgtggtcatagagttcatattcaaccaacttgaagagaagcacccc
gatagcaagatgatgcagatcaacctgacggggttcctgaatgggaagaatgcccgggaa
ttcatgagggacctttggcccctgctgctgagcgcgcaggagaacatcgctggcatcccc
tctgcttttctggagcagaagaaagaagaaatccgacagagacagattgaacaggagaag
cttgcttccttgaaaaaggttgaccaggataagaaggacaaggacacaagagaacggact
cgatcaaagagcccaagaaggtggaagatgaggtcaccagggaagcgtgaaaggaagcgt
agtccatcgcgatctccagtgcgcaaacccagcccagttgttggagactccccccctcca
cctctgatgcagtccaacactaaaatgtctcagcagcagcctgaggagccagacacgtca
ggaacaggcctgccagaaaccgttatccaagaagcttcgtctactggattaattgacaca
gttgtagagtcagttaaagcagactctgtgaccgaagtcaaagaaccgaccccagagaaa
tccctcaaaaaagaggaaagaccgaggtctcgtgaaagagaaaaggaaacgaggagggaa
agaccccaccaccgttctcgctcacgctctcactctcgttctcgcaggcgacgctcccgg
tctagatcctactcccctcgtagaagacaaagtcccagaaggagaatgtctccccgtcgg
aggagtccccctagacgtggccccaccggctccaggcacagacaccggcggtctcctgtt
cgcaggaggcgttcccgttctgcttcatcttctggtagcagctcctcagggtcacgttca
cctaagaaacctgtgaagagaatatctaccacgccaccccggaaacagctccatcgtcct
gatgcttctgtaagcccagtcgggaaggacaaacgctcgccgtctccccgagctaggaga
ggccggggctccgcttccccgccaagatcatcaggagtaaagcggaaacctggcggaagg
ggagattctccatctgattttgtaaaggccagaacctctgaggggtctgagtcagaggag
gataaaaatgaaaaaggggcaacagcagattcggtgcagcagcgacgtcagtatcgcagg
cagaatcaacagtcctcttcagattcaggatcttcctcctcagaagatgaaggacctaag
aggtcagcagcagggccaggcgccagaaacggtgaagtaaggaggaaacgcagccgtacg
ccttcacctcgtaggcgacatagagatccctccccaaggaggagacgttctccatctcct
ggacgcagacgtcgctctccttctccccctcgacgtcgtagatctccctcccctcccaga
cgcaggtctccttcccctcctccccgccgtcgctctctgtcccccagacgatattctccc
cctatccagcgccgctacagcccctcacctttgcctccacagaagaggaagctgtccagt
tctcccacgaagcgcttttctccaggccctaagcgacgctcctccagatcacctaaacgt
agaagctctcccgctcagcggagacgctcgcctccttcctcctcgtctcccccgagacat
agaaggagcccgctgtctgccaggccgaacagggacactcgatcccctgtcatgtctgct
agacgcctctccccctcccccgctaaccgaggtcgccctgttcggcggtccactagtccc
cagagacgcttcgattcgtccagcacgtccccctctgcccagcgaagacagcagtcccct
ccacacagcagtaagctcatccgtagggtgtctcgcaccccagagctgcgtaacaaaaga
atctctcccagtccaaagcctataagaagagcttcgtccagatcccgatcgctttcccct
caaccggcagctcagaaacgtccggccccagccctggctttggccccggcctcagcttct
ccgtcaccttcccgctccgccagcgggtctccacctcctcctcccctggccaaaaaggct
accagtggttctggcagtcagtctcccagcaagaattcagatgttgatgggggtggaaag
aaaaagaagaagaagaaggaaaagaaacacaagaaagataagaagcacaaaaagcacaag
aagcataagaaggagaaaagcagtgctgctgcgaccggcgacgtccaagagagtcgacct
gcagaggaagacggcgacggcgattcgaggaaggaatcggagagtgaagtcgatgacgcc
ttagacgatctggaaaagcacctccgagaaaaggcactgcgctctatgaggaaggcccag
atgtctccttcagagatgtcctga
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