Poecilia reticulata (guppy): 103458897 Help Entry 103458897         CDS       T05149                                  Symbol hif1a Name (RefSeq) hypoxia-inducible factor 1-alpha   KO K08268   hypoxia-inducible factor 1 alpha Organism pret  Poecilia reticulata (guppy) Pathway pret04137   Mitophagy - animal pret04140   Autophagy - animal pret04148   Efferocytosis Brite KEGG Orthology (KO) [BR:pret00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     103458897 (hif1a)    04137 Mitophagy - animal     103458897 (hif1a)    04148 Efferocytosis     103458897 (hif1a)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:pret03000]     103458897 (hif1a) Transcription factors [BR:pret03000]  Eukaryotic type   Basic helix-loop-helix (bHLH)    Factors with PAS domain     103458897 (hif1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  bHLH_HIF1A PAS_3 PAS_11 HIF-1a_CTAD HIF-1 PAS PAS_9 PAS_4 HLH DDRGK Motif Other DBs NCBI-GeneID:  103458897 NCBI-ProteinID:  XP_008398248 LinkDB All DBs Position LG22:22062247..22084699 Genome browser AA seq 764 aa AA seqDB search MDTAIIPEKKRVSSERRKEKSRDAARCRRGKESEVFYELSKQLPIPHSTSSNLDKASVMR LTISYLRMRKLLCIDEPVAEETTELDIQLNGSYLKALDGFLVILSEDGDMIYISENVNKC LGLAQLDLIGHSVFDFTHPCDQEELREMLVYRSGSKKVKEPSSERSFFLRMKCTLTSRGR TVNVKSATWKVLHCSGHVRVHSSEQSADGHKEPPVPYLVLICDPIPHPSNIEVPLDTKTF LSRHTMDMKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDYLTKTHHHLFAKGQVTT GQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQEEKLILSLEQTQEMKP VKKEEDQEEQQQQQQDEVQAEVKKSEAVQADDEEEEEETPEQKLHLNFQDLVIKQQEQDC LYNLLKGHPDALMLLAPAAGDTIISLDFSRPGTESETHLLKDVPLYNDVMLPSSGDKLPL PLSPLAPTEPLEPASSSAEEAKPDSFAPALSSKPPNKPSEVDNHLGFSFPMDTEMNSEFK LDLVEKLFAIDPEPKTPFNTEAMEDSELEMFAPYISMDDDFQLPCLGPDEPLSCGPVKAL ESCPVLVTPDLHSHPSSPFSAPESRTASPAPPEPVSTPPPAIVAANRVAQPEKEVPLRNL AAQNIQRKRKLSELKEIIEQGSLTQELPEKGKKLKAAEPGATRTIVLLPSDLASRLLGTT SDGGGSLFSLPQLTSYDCEVNAPLQGRQYLLQGEELLRALDHVI NT seq 2295 nt NT seq  +upstreamnt  +downstreamnt atggacacagcgatcatacctgaaaagaaaagggtgagttcggagcgcaggaaggagaaa tcaagggacgcggcgcgatgccgtcgcgggaaggagtcggaggttttctacgagttgtcc aagcagctgcccatcccccacagcaccagctccaacctggacaaggcctccgtcatgagg ctgaccatcagctacctgcgcatgcggaagctgctctgcatcgatgagccagtggcagag gagacaacagaactggacatccagctaaacggctcctacctgaaggctttagacggcttc ctggtgattctgtctgaagacggagacatgatctacatctcagaaaacgtcaacaagtgc ctcggcctggcacagctcgacctgattggacacagcgtgtttgacttcacgcatccctgc gaccaggaggagctgagagagatgctggtctacagaagtggctccaagaaagtcaaggaa ccgagttcagagcgcagcttctttctgcggatgaaatgcacgctgacgagccgggggcgc accgtcaacgtaaagtccgccacgtggaaggtgctgcattgttcgggtcacgtgcgcgtt cacagcagcgagcagagcgccgacggccacaaggagccgccggtgccatacctggttctg atctgcgacccgatccctcacccgtccaacatcgaggttcctctggacaccaagactttc ctcagccgccacacgatggacatgaagttcacatactgcgacgagaggatcactgagctg atgggttacgatccagaggacctgctgaaccgttctgtgtatgagtactaccacgctctg gactcggactatctcaccaagactcaccatcacttgtttgctaagggccaggtcaccaca ggtcagtaccggatgctggcgaaaagaggcggctttgtgtgggtggaaactcaggccact gtcatctacaacaacaagaactcgcagccccagtgcgtcgtctgcgtcaactttgtgctc agcgggatccaggaggagaaactgatcctgtctctggagcagacacaggagatgaagccg gtgaagaaagaggaggaccaggaggagcagcagcagcagcagcaggatgaagtccaggct gaagtgaagaagagcgaggccgtccaagcggacgatgaggaagaggaggaggagacccct gagcagaagctgcacctaaacttccaggatctggtgattaagcagcaggagcaggattgt ctgtacaacctgctgaaggggcatccagacgccctgatgctgctggcgccggcagccggg gacactatcatctccctggacttcagccgccccggcacagagtcagagactcacctgctg aaggacgtccctctctacaatgacgtgatgctgccctcttcaggtgacaagctgccgctg cctctgtctcctctggcgcccaccgagccgctggagcccgccagcagctccgctgaggag gcaaaacctgacagctttgctccagcgctgtcctctaaaccccccaacaaaccctcagaa gttgacaatcatctgggcttctctttccccatggacacagagatgaactcagaatttaaa ctggacctggtggagaagctgtttgccattgacccagagcccaagactcccttcaacacg gaggcgatggaggactctgagctggagatgttcgctccgtacatctccatggacgacgac ttccagctgccctgcctcggccctgacgagcctctgtcttgtggaccagtcaaagccctg gagagctgcccggtcctcgtcacgccggacctccacagccatcccagctctccgttcagt gcgccagagagtcgcacggcttctccggctccaccagaacccgtcagcacgccccctcct gccattgtggcggcaaacagggtggcacagccggagaaagaggttcctctcagaaatctg gctgctcagaacatccagcggaaaagaaagctgagcgaactgaaggagatcatcgaacag ggatctttgacccaagagctgcctgagaagggcaaaaagctgaaggcggcagagccggga gcaaccaggaccattgttcttctgccttcagatctggccagccggctgctgggcaccacc tcggacggcggcggctccctcttctcgctgccgcagctcaccagctacgactgcgaggtg aacgcccccttgcagggccgccagtacctgctgcagggggaggagcttctacgcgctctg gaccacgtcatctga

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