Poecilia reticulata (guppy): 103459006
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Entry
103459006 CDS
T05149
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pret03036
]
103459006 (msh4)
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Meiosis-specific proteins
Others
103459006 (msh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
STING_LBD
AAA_14
AAA_22
Motif
Other DBs
NCBI-GeneID:
103459006
NCBI-ProteinID:
XP_008398406
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All DBs
Position
LG22:complement(19253884..19262493)
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AA seq
909 aa
AA seq
DB search
MYQSNTEEITGSEPSDSGQTCGRSDLNQATASSCCPASLSPALPYRSSDVHTPSSSHAPS
QPGTASGQCQNGIRVGRPASLVLMSSSDTSSVRFPGGTPRLRRTPGSTGPTGASVSSVST
ISGASVIVAVVEGRGLARGEIGMASIDLKCPELTLSQFADTGTYAKVITRLHILMPMEIL
MPDTASEKGKWTKLFKLITENFPGVNLTAIQRKYYNEKKGLEYIQQLCAPEFATVLMEVQ
AKYYCLATAAALLKYLEFIQSSFYAAKSLKVIFKGSEQTTMIDSASAANLELVVNNRDNR
SDYTLLGVLNHTKTPGGARRLRSNILEPLLDVDTIITRLDAIQELLQNEELFFGLKNAIG
HFLDIDRLLSVLVQIPKQETAQAAESKITHVIQLKHTLDLVPQLREVLKTCNTALLKAYS
ATLEDNRFDIILEQIKTVVNYDTTYLKGSLNMRTQKCYAVRPNINAFLDIARRVYTEIVD
DIAGLVNKLGEKYGFPLRTSFSTTRGFFIQMKLDGVVLPEGKLPPEFIKVTKQKNSYGFT
TADLIKMNGRCDEALREIFHMSYVVMCQLLTTIHEHIHCLYKLSDTVSMLDMLLSLANAC
TISDYVRPEFTDTLAIKQGRHPILERMARQQPVSNNTYISEGSNFVIVTGPNMSGKSTYL
KQVALCQIMAQIGSFVPAEYASFRIADQIFTRIGVDDDFETNSSTFMLEMKEISYIIHNA
SDRSLTIIDELGRGTSAEEGIGICHSVCEFLLGLKVFTLFATHFLELCQLESLYPNVENQ
HMEVQHRRNRDSGAEQVVYTYLLSRGCSEERQYGLRAAEITSLPPSIIQEAKLVACKVSQ
QLLAKRPTDPETQRQRAVYHLATRLLQTARNSRLDPESLRMYLKGLKKQYEAELQTAAPA
RPTTDTEEE
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagagcaacacagaggagataaccggcagtgagccctcagactctggacaaacc
tgtggcagaagcgacctgaatcaagctaccgcctcgtcatgttgtccagcatctctctcc
cccgctctgccttaccgaagttcagatgttcacactcccagttcaagtcatgctccatca
cagccaggaacggcctcaggtcagtgccagaacggcatcagggtgggacgaccagcctcg
ttggttctcatgtcttcctcagacacttcctctgttcgcttccctggaggaacaccaaga
ctcaggaggacaccaggatcaacaggaccgacaggagcaagtgtctcgtctgtttccaca
atttctggtgcctctgtgatagtagcggtagttgaagggcgaggtttggccagaggagag
attggcatggccagtattgacttaaaatgtccagaactcacactttctcagtttgcagac
acggggacgtatgccaaggttataaccaggcttcacatcttgatgcctatggaaatcctg
atgccagatacagccagtgagaaggggaaatggacaaaactcttcaagctcatcacagag
aattttccaggtgtaaatctcactgcaatccagagaaagtactataacgagaagaaaggg
ctggagtacatacagcagctctgtgctccagaatttgccactgttctcatggaagtgcaa
gcaaagtattattgcctagcaacggcagctgctttgctgaaatacttggagttcattcag
agctcgttttatgctgccaagtctctaaaagtgatctttaagggaagtgaacagacgact
atgatcgactcggcctctgcagctaacttggagttggtggttaataacagagacaacaga
agcgactatactcttttaggagtacttaaccatacaaaaacacctggtggagcgaggagg
ctgcgctccaacatcctggagcctcttcttgatgtggatactataatcacacgcttggac
gccattcaggagctgctgcaaaatgaggagctcttcttcggcctaaagaatgcaataggt
catttcctggacattgatcgcctgctctccgttctcgttcagattccaaagcaggaaacg
gctcaagctgctgaatcgaagattactcatgtcatccagctgaaacacacactggatctg
gtgccacagttaagggaggtgttaaagacatgcaacacagctctgctaaaggcatacagt
gcaacgctggaggacaaccgatttgacataatcctcgagcagatcaagacggtggttaat
tatgacaccacatatttaaaaggaagcctgaacatgcggacccagaagtgttacgcagtg
cgacccaacatcaatgcgttcctcgacattgcacgcagagtttacactgaaattgtagac
gacattgcagggcttgtgaacaagttgggggagaaatacggctttccgttgcgcactagt
ttcagtacgacccggggattctttatccagatgaagctggatggagtggtcttacctgag
ggaaaactacccccagaattcatcaaggtcaccaagcagaagaacagctatggctttacc
actgcagacctgattaagatgaatggtcgctgtgatgaagcgctgagggagattttccac
atgtcttatgtggttatgtgtcaacttcttacaaccatccatgagcacatccactgcctg
tacaaactttctgacactgtatccatgttggacatgttgctatcgctagccaatgcatgc
acaatctcagactacgtgcgtccagagtttacagacaccttggccatcaagcaaggtcgt
caccccatcctggagcgaatggcccgacagcagcctgtctcaaacaatacctacatttcc
gagggcagcaactttgtcatcgtaacaggacccaacatgagcggcaaatctacgtacctc
aaacaggtggcgctgtgccagatcatggcccaaataggctcttttgtcccagctgagtac
gcctctttccgcatcgctgatcagattttcaccagaattggtgttgatgatgactttgaa
accaactcttctaccttcatgttggaaatgaaggagatctcttacataatccacaatgcg
agtgacaggtcattgaccattatagatgaattgggacgtggcactagtgctgaagaaggc
attggaatctgtcactcggtgtgtgagttcctccttggcctaaaggtgttcactctgttt
gccacacactttctggagctctgtcagctggagtctctctatcctaatgtggaaaatcag
cacatggaggttcagcacaggcgcaacagagactctggtgctgagcaagtggtgtataca
tatctgctgagtcgaggatgctctgaagaaagacaatacggtctgagagcagctgagatt
acctcacttcctccaagtataatccaagaggcaaagttggttgcctgtaaagtcagccag
cagcttctggccaaacgtcccactgatccagaaacgcagagacagagagctgtgtaccac
ctggcaactcgcctcttgcagactgccagaaactcaagactggatccagagagcctgcga
atgtatctgaaaggactgaagaagcagtatgaggcggagcttcagactgcagccccagca
aggcccaccactgacactgaggaggaatga
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